Bacillus mycoides WSBC 10204: bwei_5658
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Entry
bwei_5658 CDS
T03453
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bww
Bacillus mycoides WSBC 10204
Pathway
bww03030
DNA replication
bww03430
Mismatch repair
bww03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bwei_5658 (holB)
03430 Mismatch repair
bwei_5658 (holB)
03440 Homologous recombination
bwei_5658 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bww03032
]
bwei_5658 (holB)
03400 DNA repair and recombination proteins [BR:
bww03400
]
bwei_5658 (holB)
Enzymes [BR:
bww01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bwei_5658 (holB)
DNA replication proteins [BR:
bww03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bwei_5658 (holB)
DNA repair and recombination proteins [BR:
bww03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bwei_5658 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
TIP49
Motif
Other DBs
NCBI-ProteinID:
AIW88169
UniProt:
A0A084ITB3
LinkDB
All DBs
Position
5407464..5408447
Genome browser
AA seq
327 aa
AA seq
DB search
MINTWEQLSAIQPIGVKMLMNSIAKERISHAYLLEGGKGTGKFATAIQMAKSFLCSQRNG
VEPCHVCTNCRRIDSGNYPNLHIVKPDGLSIKKQQIHDLQEEFSKTGLEANKKVYIIEHA
DRMTANAANTLLKFLEEPSSDTTAILLTEQSHQILNTILSRCQVVTFRPLPTESLIKRLE
EEGITVSLSTLAAQLTNSFEEALLMCNDEWFAQARALVIKLCEALEKDKASIFFVQEKWG
KHFGEKEQLQQGLDMLLLIYKDLLYVQLGEEDRLVFHEQKEMFESFSYAQKRIVSALFNI
LEAKNRINANVNAQLVFEQLVLRLQEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgataaatacgtgggagcagctttctgctatacagcccatcggtgtcaaaatgttgatg
aatagcattgcaaaagagcgtatatctcacgcttacttgttagagggagggaaagggact
gggaagttcgccacagcaattcaaatggcaaaaagttttctctgttcacaaagaaatggt
gtagagccttgtcatgtatgtacgaattgtcgccgaattgattcaggtaactacccaaac
ttacatattgtaaaaccagatggattatctattaaaaaacagcaaattcatgatttacaa
gaagagttttcaaaaacaggattagaagcaaataaaaaagtatatattattgagcatgca
gatcgtatgacagcaaatgcagcgaatacgctcttaaagtttttagaagaaccaagtagt
gatacaacagctattttacttactgaacaaagtcatcagattttaaatacaatcttatct
cgttgtcaggttgttacgtttaggccgttgcctacagaatctttaattaagaggttagag
gaagaaggtattacagtttctttatctacacttgctgcgcagcttacaaatagttttgaa
gaagctttattaatgtgtaatgatgaatggtttgcacaagcgagagctttagtgataaaa
ttatgtgaagcgctcgaaaaagataaggcctctattttttttgtacaagaaaaatggggg
aagcactttggagagaaagaacaattacagcaaggcttagatatgttactccttatttat
aaggatttattatatgttcaacttggagaagaagatcgtcttgtttttcatgagcagaaa
gagatgtttgaatccttttcttatgctcagaagcgcattgtatcagctctctttaatata
ttagaggcaaaaaatagaatcaacgctaatgtaaatgcgcagcttgtgttcgaacagtta
gtgttgcggttgcaggagggatga
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