Blautia wexlerae: NQ550_11280
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Entry
NQ550_11280 CDS
T08498
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bwx
Blautia wexlerae
Pathway
bwx03030
DNA replication
bwx03410
Base excision repair
bwx03420
Nucleotide excision repair
bwx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bwx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ550_11280 (ligA)
03410 Base excision repair
NQ550_11280 (ligA)
03420 Nucleotide excision repair
NQ550_11280 (ligA)
03430 Mismatch repair
NQ550_11280 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwx03032
]
NQ550_11280 (ligA)
03400 DNA repair and recombination proteins [BR:
bwx03400
]
NQ550_11280 (ligA)
Enzymes [BR:
bwx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NQ550_11280 (ligA)
DNA replication proteins [BR:
bwx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NQ550_11280 (ligA)
DNA repair and recombination proteins [BR:
bwx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NQ550_11280 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ550_11280 (ligA)
MMR (mismatch excision repair)
DNA ligase
NQ550_11280 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ550_11280 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
PTCB-BRCT
BRCT_2
DNA_ligase_ZBD
DUF7307
Nlig-Ia
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
UWO18874
LinkDB
All DBs
Position
complement(2438032..2439990)
Genome browser
AA seq
652 aa
AA seq
DB search
METAAIMRMKELVQKLDRAAKAYYQQDTEIISNREYDQMYDELQALEKETGTVLANSPTV
SVGYEAVDQLPKEEHESPMLSLDKTKDREVLREFIGEHKTLLSWKLDGLTIVLTYENGGL
AKAVTRGNGVTGEVVTNNARVFKNVPLKIPYQGRLVLRGEAIITYSDFERINESIEDVDA
KYKNPRNLCSGSVRQLNNEITARRNVRFYAFTLVSADGVDFHNSRARQFEWLKEQGFDVV
EYRTVTASTLDEAMEYFSTAITENDFPSDGLVALYDDIAYGDSLGRTAKFPRNAFAFKWA
DEIRETHLLEIEWSPSRTGLINPVAVFEPVELEGTTVSRASVHNVSILKELQLGIGDTIT
VYKANMIIPQIAENLTRSSKLEIPDTCPACGHGTQIQKVNDVEALYCTNPDCAAKKIKSF
ALFASRDAMNIDGLSEATLEKFIARGFIHDFGDIFEIGKHRDEIVEMDGFGEKSFENLMT
SLDKAKETTLAKVIYSLGIANIGLANAKVICRHFDDDLEKIRHADKEEISSIDTIGPVIA
GSLTDYFSNEDNNRKLDHLMSHLTVKKEEKTGEQIFRNMNFVITGSVEHFANRAQAKEFI
ESLGGKVTGSVTSKTNYLINNDTTSNSSKNKKAKELGIPILSEEDFLKMAQQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagcagcgatcatgcgaatgaaagagctggtgcaaaagctggacagggcagca
aaggcgtattaccagcaggatacagagatcataagcaacagagagtacgatcagatgtac
gacgagcttcaggctctggagaaagagacaggcactgttctggcaaacagcccaaccgta
agcgtagggtacgaggcagttgaccagcttccaaaagaagaacacgaatcccccatgctg
tctctggacaagactaaggacagagaagttctgagggaatttatcggggaacacaaaacg
cttctgtcatggaagctggacggactgacgatcgttcttacctacgagaatggaggactt
gccaaagcagttacacgtggaaacggtgtgacaggagaggttgtcaccaataatgccaga
gtatttaagaacgttcctcttaaaatcccgtatcagggaagactggtgttgcgtggggaa
gcgatcattacttattcggactttgaacggatcaatgaatccatagaagacgttgatgcg
aaatacaagaatccgagaaacttatgcagcggttctgtccgccagttaaacaatgagatc
acagcccgcaggaatgtgcgtttctacgcatttacgctggtaagcgccgacggggttgat
ttccataattcaagagcccggcagtttgaatggctgaaagaacagggatttgatgtagtg
gaatacaggacagtcacagcttcaacgctggatgaagccatggaatatttttcaactgcg
atcactgagaatgattttccgtcggacggactggttgctctttatgatgatattgcatac
ggagattcccttggaagaacagcgaaatttcccagaaatgcttttgcattcaaatgggca
gatgagatcagagaaacccatcttctggagatcgaatggagcccgtcaagaacagggctg
atcaatccggtggctgtttttgaaccggttgagctggagggaaccactgtgagccgcgcc
agcgtacacaatgtgagcattctaaaagaattgcagcttggtatcggggatacgatcact
gtatataaagcaaatatgatcattccgcagattgcagaaaacctcacacgcagcagtaaa
ctggaaattccggatacttgccctgcatgtggccatggaacacagatacagaaggtaaat
gatgtggaggcactttactgtacaaatcctgactgtgccgcaaagaagatcaaatccttt
gcactttttgcaagcagggatgccatgaacattgacggactgtcagaagcaacactggag
aaattcattgcaagaggctttattcatgatttcggagatatttttgagattgggaagcat
cgtgatgagatcgtggagatggacggattcggggagaaatcctttgagaacctgatgacc
agccttgataaagctaaggagactactcttgcgaaggtgatctacagccttggaatcgcc
aatatcggtcttgccaatgcaaaagtgatctgcaggcattttgatgatgatctggagaag
atccgtcatgcagataaagaggagatcagctctattgataccatcggaccggtaattgcc
ggaagtctgactgattatttttcaaacgaggataataacagaaaactggatcatctgatg
agccatctgactgttaagaaagaagaaaagacaggtgagcagattttccggaacatgaat
ttcgttatcacaggaagtgtggagcactttgcaaacagagcacaggcaaaggaatttatt
gagtctctgggaggcaaggtgaccggatcagtaacatcgaagacgaactacctgatcaat
aatgacacaacttccaattcttcaaagaataaaaaagccaaagaactgggaattccgatc
ctttctgaagaagatttcctgaagatggcacaacaataa
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