Bradyrhizobium xenonodulans: I3J27_00725
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Entry
I3J27_00725 CDS
T09324
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I3J27_00725 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_00725 (nth)
Enzymes [BR:
bxn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I3J27_00725 (nth)
DNA repair and recombination proteins [BR:
bxn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I3J27_00725 (nth)
Prokaryotic type
I3J27_00725 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
WBL78986
LinkDB
All DBs
Position
complement(157754..158533)
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AA seq
259 aa
AA seq
DB search
MAKITRKPAPRKAPASRKKAKATVAKPKPVKKPVKKSASARKPLKATKPWTPAEVREVFD
RFRKANPEPKGELEHVNPFTLLVAVVLSAQATDAGVNKATRALFETADTPQKMLDLGEER
LREYIKTIGLYRTKARNVIALSAKVLSEFGGEVPRTRAGIESLPGAGRKTANVVLNMAFG
EHTMAVDTHVFRVGNRTGLAPGKTPLEVELGLEKVIPAEFMLHAHHWLILHGRYTCLARK
PRCEVCLINDLCRWPEKTV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatcacccgcaagccggccccgcgcaaagcgccggcgtcgaggaaaaaggca
aaggcgactgttgcgaagcccaagcccgtcaagaagcccgtcaaaaaatcggcttccgcc
aggaaaccgctgaaggccacaaaaccctggacgccggccgaggtccgcgaggtcttcgac
cgtttccgcaaggccaatcccgagccgaaaggcgagctcgagcacgtcaatcccttcacg
ctgctggtcgccgtggtgctgtcggcgcaggccaccgacgccggggtcaacaaggcgacg
cgcgccttgttcgagaccgccgacacgccgcagaagatgctcgacctcggcgaagagcgt
cttcgcgagtacatcaagaccatcggcctctatcgcaccaaggccaggaacgtaatcgcg
ctgtcggcaaaggtgctcagtgagttcggcggcgaggtgccgcgcacgcgcgcgggaatc
gagtcactgccgggagccgggcggaaaaccgccaatgtcgtgctcaacatggccttcggc
gagcacaccatggcggtcgacacgcacgtcttccgcgtcggcaaccgtaccgggctcgcg
cccggcaagacgccgctcgaagtcgagcttggcctggagaaggtgatcccggccgagttc
atgctgcatgcgcatcattggctgatcctgcacggccgctatacctgcctcgcgcgcaag
ccgcgctgcgaggtttgcctgatcaacgatctctgccggtggccggagaagacggtctga
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