Bradyrhizobium xenonodulans: I3J27_01960
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Entry
I3J27_01960 CDS
T09324
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn00020
Citrate cycle (TCA cycle)
bxn00785
Lipoic acid metabolism
bxn01100
Metabolic pathways
bxn01110
Biosynthesis of secondary metabolites
bxn01120
Microbial metabolism in diverse environments
bxn01200
Carbon metabolism
bxn01210
2-Oxocarboxylic acid metabolism
Module
bxn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bxn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I3J27_01960
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
I3J27_01960
Enzymes [BR:
bxn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
I3J27_01960
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WBL79213
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All DBs
Position
403537..406503
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AA seq
988 aa
AA seq
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MSRQDANAAFALSSFLQGTNATYIDEIYARYEKDPSSVDAEWQEFFKSLNDQPADVRKNA
EGPSWERTNWPLTPQDDLTSALDGNWAEVEKAVGAKIAAKAQKAGDKGAGLSSADLLQAT
RDSVRALMLIRSYRMRGHFHAKLDPLGIEAPRNREELDPRTYGFSEADFDRKIFLDHVLG
LEYGTLREITAICERTYCQTLGVEFMHISNAAQKAWIQERIEGPDKEISFTREGRRAILM
KLIEAEGFEKFCDTKFTGTKRFGLDGGESLIPALEQIIKRGGNLGVKEIVLGMPHRGRLN
VLTQVMGKAHRALFHEFKGGSANPDAVEGSGDVKYHLGASSDREFDGNRIHLSLTANPSH
LEIVDPVVLGKVRAKQDQHGDPPDMRISVLPLLMHGDAAFAGQGVVAECFGLSDLKGYRT
GGSVHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAIEFR
QKFHKPVVIDMFCYRRHGHNEGDEPAFTQPVMYKKIAAHPSTLELYARRLVSEGVLTEGE
VDKAKADWRARLDAELEAGSGYKPNKADWLDGKWAGFKIADQEEDARRGVTGVDVAALKD
IGRKITKVPDGFRAHRTIQRFLENRSKAIDSGTGIDWATGEALAFCTLLNENHHVRLSGQ
DSERGTFSQRHSVLIDQEDESRYTPFNHLGNEQGHYEVINSLLSEEAVLGFEYGYSLAEP
NTLTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLER
YLQMCAEDNMQVVYPTTPANYFHVLRRQLHREIRKPLILMTPKSLLRHKRAVSRLEELAK
GTTFHRILYDDAQMLPSEAVKLVPDEKIRRIVLCSGKVYYDLYEEREKRGMDDIYLMRVE
QLYPVPLKALVAELSRFKKAEVVWCQEEPRNMGAWHFIEPYLEWVLNQVNGVSRRPRYVG
RAASAATATGLMSKHQAQLKAFLDEALS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaagacgcgaacgcagcctttgccctctcctcctttttgcagggcaccaac
gccacctacatcgacgaaatctacgcccgctacgagaaggacccgtcctcggtcgacgcc
gagtggcaggaattcttcaagagcctcaacgaccagcccgccgacgtccggaagaacgcc
gagggcccgtcctgggagcgcaccaactggccgctgaccccgcaggacgatctgacctcc
gccctcgacggcaactgggccgaagtcgagaaggcggtcggtgccaagatcgccgccaag
gcgcagaaggcgggtgacaagggcgccggcctctcctcagccgatttgctccaggcgacg
cgcgactccgtccgcgccctgatgctgatccgctcctaccgcatgcgcggccatttccac
gccaagctcgatccgctcggcatcgaagccccgcgcaaccgcgaagagctcgacccgcgc
acctacggcttcagcgaggccgatttcgaccgcaagatcttcctcgatcacgtgctcggg
ctcgaatacggcacgcttcgggagatcaccgcgatctgcgagcgcacctactgccagacg
ctcggcgtcgagttcatgcatatcagcaatgccgcgcagaaggcctggatccaggagcgc
atcgagggtccggacaaggagatctcgttcacccgcgaaggccgccgcgccatcctgatg
aagctgatcgaagccgagggcttcgaaaagttctgcgataccaagttcaccggcaccaag
cgcttcggcctcgacggcggcgaatccctgatccccgcgctcgagcagatcatcaagcgc
ggcggcaatctcggcgtgaaggaaatcgtgctgggcatgccgcatcgcggccgcctcaat
gtgctgacccaggtgatgggcaaggcgcaccgcgcgctgttccacgagttcaagggcggc
tcggccaaccctgacgcggtggaaggctccggcgacgtcaaatatcacctcggcgcgtcc
tcggaccgcgagttcgacggcaaccgcatccatctgtcgctgaccgccaatccctcgcat
ctcgagatcgtcgatcccgtcgtgctcggcaaggtccgcgccaagcaggaccagcacggc
gatccgcccgacatgcgcatctcggtgctgccgctcctgatgcatggcgacgccgcgttc
gccggccagggcgtggtcgcggaatgcttcggtctgtcggacctgaagggctaccgcacc
ggcggctccgtgcacttcatcgtcaacaaccagatcggcttcaccacctatccgcgttac
tcgcgttcctcgccctatccgtcggatgtggcgaagatgatcgacgcgccgatcttccac
gtgaacggcgacgatccggaagccgtggtgttcgcggccaaggtcgcgatcgagttccgg
cagaaattccacaagcctgtcgtcatcgacatgttctgctaccgcaggcatggccataac
gagggcgacgagccggcattcacccagccggtgatgtacaagaagatcgcggcgcacccg
tccacgctcgagctctacgcccgccgcctcgtcagcgaaggcgtgctgaccgagggcgag
gtcgacaaggccaaggccgactggcgcgcgcggctcgatgccgagctggaagccggctcc
ggctacaagcccaacaaggccgactggctcgacggcaagtgggccggcttcaagatcgcc
gaccaggaagaagatgcgcgccgcggcgtgaccggcgtcgacgtcgccgcgctgaaggat
atcggccgcaagatcaccaaggtgccggacggcttccgcgcccaccgcaccatccagcgt
ttcctcgagaaccgctccaaggcgatcgactccggcaccggcatcgactgggcgaccggc
gaggcgctggcgttctgcacgctgctcaacgagaaccatcatgtccgcctgtccggacag
gactcggagcgcggcaccttctcgcagcgtcactcggtcctgatcgaccaggaagacgag
agccgctacacgccgttcaaccatctcggcaacgagcagggccattacgaggtcatcaac
tcgctgctgtcggaagaggccgtgctcggcttcgaatacggctattcgctcgccgagccg
aacacgctgacgctgtgggaagcccagttcggcgacttcgccaacggtgcgcaggtcgtg
ttcgaccagttcatctcttcgggtgagcgcaaatggctgcgcatgtccggcctcgtctgc
ttgctgccgcacggctatgagggccagggtccggagcattcctcggcgcgcctggagcgt
taccttcagatgtgcgcggaagacaacatgcaggtggtctatccgaccacgccggcaaac
tacttccacgtgctgcgccgccagctgcaccgcgagatccgcaagccgctgatcctgatg
acgccgaagtcgctgctgcgccacaagcgggcggtctcgcgtctcgaggaactcgcgaag
ggaacgaccttccaccgcattctctacgatgacgcccagatgctgccgagcgaagcggtc
aagctcgtccccgacgagaagatccgccgcatcgtgctgtgctccggcaaggtctattac
gacctctacgaggagcgcgagaagcgcggcatggacgacatctatctgatgcgcgtcgag
cagctttatccggtgccgctgaaggcgctggtggccgagctgtcccgcttcaagaaggcc
gaagtggtgtggtgccaggaagagccccgcaacatgggtgcctggcacttcatcgagccc
tatctggaatgggtgctcaaccaggtgaacggcgtgagccggcgtccgcgttatgtcggc
cgcgccgcttccgccgcgaccgccactggtctgatgtccaagcatcaggcgcagctgaag
gcgttcctggacgaagcactgagctga
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