Bradyrhizobium xenonodulans: I3J27_35875
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Entry
I3J27_35875 CDS
T09324
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn00270
Cysteine and methionine metabolism
bxn00450
Selenocompound metabolism
bxn00670
One carbon pool by folate
bxn01100
Metabolic pathways
bxn01110
Biosynthesis of secondary metabolites
bxn01230
Biosynthesis of amino acids
bxn04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
I3J27_35875 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
I3J27_35875 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I3J27_35875 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
I3J27_35875 (metH)
Enzymes [BR:
bxn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
I3J27_35875 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WBL78260
LinkDB
All DBs
Position
7612989..7616834
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AA seq
1281 aa
AA seq
DB search
MTVPPSPKRTALINAARERILVLDGAMGTMIQNLQFDEKAFRGERFKNFHRDLRGNNDLL
ILTQPQAIEDIHAAYLRAGADIVATNTFSTTSIAQADYDLTDIVYEMAREGARLAGNAAR
RVEAEDGKPRFVAGAIGPTNRTASISPDVSNPGYRAVTFDDLRKSYGEQINGMLDGGVDL
LLVETIFDTLNAKAALYAIAEITEARGIDVPVMVSGTITDKSGRLLSGQMPEAFWNSVRH
AKPVTIGFNCALGAEDLRAHIADIGRVADTLVCAYPNAGLPNEFGQYDETPEYMARLVGE
FARDGLVNIVGGCCGTTPDHIAAIAASVAPHKPRIVPEIAPRLRLSGLEPFVLTDAIPFV
NVGERTNVTGSARFRKLITAGDYTAALQVARDQVENGAQIIDVNMDEGLLDSEAAMVTFL
NLVAAEPDIARVPVMVDSSKFSVIEAGLKCVQGKPVVNSISMKEGEEKFIHEAKIARRHG
AAVVVMAFDEVGQADTFARKTEICKRAYDILVNRVGFPPEDIIFDPNIFAIATGIEEHNN
YGVDFIEATRWIRQNLPGAHISGGVSNLSFSFRGNEPVREAMHSVFLYHAIKAGMDMGIV
NAGQMIVYDDIDAELRQVCEDVVLNRDATASERLLALAEKFRGNKSQTKEADLAWREWPV
AKRLSHSLVHGITEFIETDTEEARKASKRPLDVIEGPLMAGMNVVGDLFGDGKMFLPQVV
KSARVMKQAVAWLMPFMEEEKARNLANGIGTEGSSSAGKIVLATVKGDVHDIGKNIVGIV
LQCNNFEVIDLGVMVPAAKIVETVKAEKADIVGLSGLITPSLDEMAFFAGELQREGLKLP
LLIGGATTSRVHTAVKIDPSYRAGPVVHVNDASRAVGVASSLLSPEKREAYAAEVRAEYA
KISDAHLRAQADKKRLKLAAARANRVPVDFAANKPVKPTFLGTKSFDEYDLAELVPYIDW
TPFFQTWELAGRFPAILDDAKVGEVARSLYDDARKMLDLIVKEKWFRARATIGFWPANAQ
GDDIVLYADDNRTKQIATLHTLRQQLEKREGRFNAALADFIAPAGVPDYVGGFVVTAGIG
EDAVADRFKMANDDYSSILCKALADRLAEAFAERMHARVRREFWAYAPDEALSNDDMILE
KYSGIRPAPGYPAQPDHTEKATLFELLDAENTAGVKLTESFAMWPGSSVSGLYFANPESY
YFGVGKIERDQVEDYAARKGMSVAEAERWLAPVLNYIPSREDKAFAATPANDEASSDLAS
HPPGCTCAVHLVWQKKRAGAG
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacctccctctcccaagcgaactgccctgatcaatgccgcgcgcgaacgcatc
ctcgtgctcgacggcgccatgggcacgatgatccagaacctccagttcgacgagaaagcc
ttccgcggcgagcgcttcaagaactttcatcgcgacctgcgcggcaacaacgatttgttg
atcctgacccagccgcaggcgatcgaggacatccacgccgcgtacttgcgtgccggggcc
gacatcgtcgcgaccaacacgttctcgaccacctcgatcgcgcaggccgattacgatctc
accgacatcgtctacgagatggcgcgcgaaggcgcccgccttgccggcaatgccgcgcgc
cgcgtcgaggccgaggacggcaagccgcgtttcgttgcgggcgccatcggcccgaccaac
cgcaccgcctcgatctcgcccgacgtgtccaatcccggctaccgcgccgtcaccttcgac
gacttacgcaaatcctatggcgagcagatcaacggcatgctcgacggcggcgtcgacctg
ctgctggtcgagaccatcttcgatacgctgaacgccaaggcggcgctctacgcgatcgcg
gagatcaccgaagcgcgcggcatcgacgtgcccgtgatggtgtcgggcaccatcaccgac
aaatccggccgcctgctctcgggccagatgccggaagccttctggaactcggtgcggcac
gccaagcctgtcaccatcggcttcaactgcgcgctcggcgccgaagatttgcgcgcccac
atcgccgatatcggccgcgtcgccgacactcttgtttgtgcctatccgaacgccggcctt
cccaacgaattcggccagtacgacgagacgccggagtacatggcgcgcctggtcggcgag
ttcgcccgcgacggcctcgtcaacatcgtcggcggctgctgcggcaccacgccagaccat
atcgcagcgatcgcagctagcgtggccccgcacaagccgcggatcgtgccggagattgcg
ccgcgcctgcggctctccggcctcgagccgttcgtgctgacggatgccattccgttcgtg
aatgtcggtgagcgcaccaacgtcacgggctccgcccgcttccgcaagctgatcaccgcc
ggcgactacaccgccgcactgcaggtcgcccgcgaccaggtcgagaacggcgcgcagatc
atcgacgtcaacatggacgagggcctgctcgattctgaagccgcgatggtgaccttcctc
aacctcgtcgccgccgagcccgatatcgcccgcgtccccgtcatggtggactcgtcgaag
ttctcggtgatcgaggccggcctgaaatgcgtgcagggcaagccagtcgtcaattcgatc
tcgatgaaggaaggcgaggagaaattcatccacgaggccaagatcgcgcggcgtcacggc
gcagccgtcgtcgtgatggcgttcgacgaagtcggccaggccgacaccttcgcgcgcaag
accgagatctgcaagcgcgcttacgacatcctggtcaaccgcgtcggcttcccgccggaa
gacatcatcttcgatcccaacattttcgcgatcgcgaccggcatcgaggagcacaataat
tacggcgtcgacttcatcgaggcgacgcgctggatccgccagaaccttccgggcgcgcat
atctccggcggcgtctcgaacctctcgttctcgttccgcggcaacgaaccggtgcgcgag
gccatgcactcggtgttcctgtatcatgccatcaaggccggcatggacatgggcatcgtc
aatgccgggcagatgatcgtctatgatgacatcgacgccgagctgcgccaggtgtgcgag
gacgtcgtcctcaatcgcgacgcgaccgcgtccgagcgcctgctggcgctggcggagaaa
ttccgcggcaacaagtcccagaccaaggaagccgatctggcctggcgcgaatggccggtg
gcgaagcggctgtcgcattcgctggtgcatgggatcaccgagttcatcgaaactgacacc
gaggaagcccgcaaggcgtcgaagcgtccgctcgacgtgatcgaggggccgctgatggca
ggcatgaacgtggtcggcgacctcttcggcgacggcaagatgttcctgccgcaggtggtg
aaatccgcccgcgtgatgaagcaggcggtggcctggctgatgcctttcatggaagaggag
aaggcgcgcaacctcgccaacggcatcggcaccgaaggctcctcgtccgccggcaagatc
gtgctcgcgaccgtcaagggcgacgtccacgacatcggcaagaacatcgtcggcatcgtg
ctccagtgcaacaatttcgaggtcatcgacctcggcgtgatggtgccggccgccaagatc
gtcgagaccgtgaaggcggagaaagccgacatcgttggtctctccggcctgatcacgccc
tcgctcgacgagatggcgttcttcgccggcgaattgcagcgtgaaggcctcaagctgccg
ctcttgatcggcggtgccaccacgagccgcgtgcataccgccgtgaagatcgacccgagc
tatcgcgccggtcccgtcgttcacgtcaacgacgccagccgcgcggtcggcgttgcctcc
tcgctgctctcgcccgagaagcgcgaggcctatgccgccgaggtgcgcgccgaatacgca
aagatctcggacgcgcatctgcgcgcgcaggccgacaagaagcgcctgaagctcgcggcc
gcccgcgccaatcgcgtgccggtcgactttgccgccaacaagccggtgaagccgaccttc
ctcggcaccaagagcttcgacgaatacgatcttgccgagctcgtgccctatatcgactgg
acgccgttcttccagacctgggagctcgccgggcgcttccccgccatcctcgacgatgcc
aaggtcggcgaggtcgcgcgctcgctctatgacgatgcgcgcaagatgcttgacctgatc
gtcaaggagaaatggttccgggcgcgcgcgacgatcggcttctggccggcgaacgcacag
ggcgacgacatcgtgctctatgccgacgataacaggaccaagcagatcgcgacgctgcac
acgctgcgccagcagctcgagaagcgcgagggccgcttcaacgcggcgctcgccgacttc
atcgcgcccgcgggcgtgcccgactatgtcggcggcttcgtcgtcaccgcggggatcggc
gaggatgcggtcgcggaccgcttcaagatggccaacgacgactactcctcgatcctgtgc
aaggcgctggccgaccgcctcgccgaagccttcgccgaacgcatgcatgcccgcgtgcgc
cgcgagttctgggcctatgcgcccgacgaggcgctctccaatgacgacatgatcctggag
aagtactctgggattcgtcccgcgcccggctatcccgcgcagcccgaccacaccgagaag
gcgacgctgttcgagctgctcgatgccgagaatacggccggcgtgaaactgaccgagagc
tttgcgatgtggccgggctccagcgtgagcgggctctacttcgccaaccccgagagctat
tatttcggcgtcggcaagatcgagcgcgaccaggtcgaggactatgccgcgcgcaagggc
atgagcgtcgcagaggccgagcgctggctggcgccggtgctgaactacatcccctcgcga
gaggacaaggctttcgcggcaacgccggcgaatgacgaggcgtcgagcgacctcgcctcg
catccgccgggctgcacctgcgcggtgcatctcgtctggcagaagaagcgcgcgggggcc
ggatag
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