Bipolaris zeicola: COCCADRAFT_2854
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Entry
COCCADRAFT_2854 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_2854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_2854
Spliceosome [BR:
bze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
COCCADRAFT_2854
Complex C
U5 SnRNP specific factors
COCCADRAFT_2854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Rrn6_HB
Ras
Motif
Other DBs
NCBI-GeneID:
19146420
NCBI-ProteinID:
XP_007709671
JGI:
2854
UniProt:
W6YWT1
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MDDLYDEFGNFIGEAESDEDVQSVGDAADAYVVDDEDEAEPNNQQLMEVDDGPSNAVVLH
EDKQYYPSASDVYGPDVEVLVQEEDTQSLAQPIVAPVVQKKFSIEEADLPPVYHSRELLT
DLMNFPDQIRNIAIAGHLHHGKTAFMDMLVMETHDIQDRLDYKRGKKREEQLRYTDVHVL
ERERGLSIKAAPMSLVLQNTKSKSHLFNILDTPGHVNFADEVAASLRLVDGVVLVVDVVE
GVQVNTEQVIKHAVLEDLPLTLVINKMDRLILELKLPPSDAYFKIKHVIEEVNTVIENTI
PGRGESRRVSPEKGNVAFACSSMRWCFTIQSFAKMYSDFYPGPSKLPGFGVPMKGLDIEK
FSMRLWGDIFYNPGSRKFSRKRQEEGSQRSFVHWILEPVYKIYSHTLSQSPDDLKETLET
LGIRLKPSEYKADAKELMRLVCQQYFGPSLGFVDMITQHVPSPEEGAQRLLQKHYTGPLD
TKTAEAMQKCDQNGPLVIHVTKLFNATDAKSFTALGRVLSGTATSPQSVRVLGEGYTIED
EEDMVVATVTDTWIAQSRYNIPVSGVPAGNWVLLGGVDNSIVKTATIVATKLPEEEDAYI
FKPIKHFFESVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVVLGTGELY
MDCVLHDLRRLYADMEIKVSDPVTRFCETVVEMSSIKCYASTPNKKNKLTMIAEPLDPGI
AEDIEAGKVNIKDPVRVVSKFFEQNYGYDLLAARNIWAFGPDDMGPNILQNDTLPTEVDG
KILRSVRDTLRQGFSWATREGPLCEEPIRNTKFRLTDVELASEAIFRGGGQIIPTSRRAC
YSSFLMASPRLMEPVYSCSMIGPSDTKSSLYTVLARRRGHVLQDGPIAGTPLYNVRGLIP
VIDSFGFETDLRIHTQGQVSLSLVFDRWSIVPGDPLDTSISTRPLEPATAQQLARDFVLK
TRRRKGLAEDVTVKKFLEPELCRSLIESGVLDG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctttacgacgagttcggaaactttattggcgaggctgagtccgacgaagat
gtccagagcgttggcgatgcagccgacgcctatgtcgtcgacgatgaagacgaggcggag
cctaacaaccagcagttgatggaggtcgacgatggaccatccaatgccgttgtcctgcac
gaggacaagcaatactacccttccgcttcggacgtatacggccccgatgtcgaggtgctg
gtgcaagaggaagacacacagtcgctggcccagcccattgtcgcgccagtcgtgcagaag
aagttctcgattgaagaggccgacttgccaccagtctaccattccagagagctactgact
gatctgatgaacttcccagatcagattcggaacattgccattgctggacacttacaccat
ggaaagactgcgtttatggacatgctggtcatggagacgcacgacatccaggaccgcctc
gactacaagaggggaaagaagcgcgaggagcagctacgctacaccgacgtacacgtgctc
gaacgcgagcgcggcctctcaatcaaggcggcgccaatgagcctggtgctccagaacaca
aagtcgaagtcgcaccttttcaacatactcgacacccccggtcacgtaaactttgccgac
gaagtcgccgcctcattgcgcctggtagacggagtggtgttggtggtggacgttgttgag
ggtgtgcaggtcaacacggagcaggtcatcaaacatgcggtcctcgaggacttgcctctc
acgctggtcatcaacaagatggatcgcctgattctggagctgaagctaccgccgagcgac
gcatactttaagattaaacacgtcatcgaggaggtcaacactgtcatcgagaacaccatc
cctggtcgtggtgagagcaggcgtgtaagccctgaaaaaggcaacgtcgctttcgcctgc
tccagcatgagatggtgtttcaccattcagtcgtttgccaagatgtactccgacttttat
cctggcccctcaaagcttccaggatttggcgttcccatgaagggactggacatcgagaag
ttttccatgcgactttggggcgatattttctacaacccaggaagccgcaagttcagtcgc
aagcggcaagaggagggatcgcaacggtcttttgtccactggatcctagagcccgtctac
aagatttactcgcatacgctcagtcagagtccggatgatctcaaggaaacactagaaact
ctgggcatacggctcaagccatccgaatacaaagcggacgcgaaggagctaatgcgactc
gtatgccaacagtattttggtccttccctgggttttgtagatatgatcacgcagcacgtt
ccatcgccagaggaaggtgcacaacgacttctgcaaaaacactacactggacctttggac
acaaaaacggccgaagcgatgcaaaagtgcgaccagaacggccctcttgtcatacatgtc
acaaagctcttcaacgcgaccgacgcaaaatcattcactgcattgggtcgagtgctgagt
ggtaccgcaacttctccgcagtcagtgcgtgtactcggcgaaggctatacaattgaggat
gaggaagacatggttgttgcaacagtgacagatacatggatagctcaatcgaggtacaac
atcccagtcagcggcgtgccagcaggcaactgggtattacttggcggtgtcgacaactca
atagtcaagacggcaacaatcgtagcgaccaagctaccggaagaggaggacgcttatatc
ttcaagcctatcaagcacttctttgaatccgttttcaaggttgccgtcgaaccaatcaac
ccctctgagctcccaaagatgcttgacggtctccgcaagattaacaagtcatatccgctc
atcaccacaaaggtcgaggaatcaggagagcacgtggttctcggtactggcgagctttac
atggactgtgtattgcacgatctccgacgactgtatgctgacatggagatcaaggtctct
gatccagtcacccggttctgcgagaccgtcgttgagatgtcttcgataaagtgctacgct
tccactccgaacaagaaaaacaagcttaccatgattgctgagccgctagacccaggaatc
gctgaagatatcgaagcgggcaaagtcaacatcaaagatcctgtccgtgtagttagcaag
ttttttgagcaaaactacgggtacgatctgctcgcagcccgcaatatctgggctttcgga
ccagatgacatgggtcccaacatcctacaaaatgacacactccctacagaggtcgacggc
aagattcttcgaagcgtgcgagacacccttcgacagggtttcagctgggccacgcgcgag
ggcccgctctgcgaagaacctatccgaaacacgaagttccgtcttaccgatgttgagctt
gcatcggaagctattttccgcggtggtggtcagatcattcccacgagtcgacgagcatgc
tactcatctttcctcatggcgagtcccaggctgatggagccggtatactcgtgcagtatg
attggtccatccgacacaaagagtagtctttacacagttcttgcacggagaagagggcac
gttctacaagatggacccattgcaggtactccactttacaatgtgcgcggtctaatcccg
gtcatcgactctttcggtttcgagaccgatttgaggatccacacacaaggccaagtctct
ctctcccttgtctttgatcgctggtccattgtccctggtgaccctctcgacacaagcatc
tcaacccgccccctcgaacccgcaaccgcacaacaactagcacgcgactttgtgctcaag
acccgacgaagaaagggtctggctgaagatgttactgtcaaaaagtttttggagcccgag
ctatgccgtagtttgattgaaagcggcgtgctggatggatag
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