KEGG   Bipolaris zeicola: COCCADRAFT_3251
Entry
COCCADRAFT_3251   CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bze  Bipolaris zeicola
Pathway
bze03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    COCCADRAFT_3251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_3251
Enzymes [BR:bze01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     COCCADRAFT_3251
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     COCCADRAFT_3251
SSDB
Motif
Pfam: DNA_ligase_A_N DNA_ligase_A_M BRCT_2 RNA_ligase DNA_ligase_A_C BRCT LIG3_BRCT Bac_globin
Other DBs
NCBI-GeneID: 19147254
NCBI-ProteinID: XP_007710105
JGI: 3251
UniProt: W6Y7I4
LinkDB
Position
Unknown
AA seq 993 aa
MVEDTPMPDTDAVRENTLMYGHDDDLDEKYPLRPLNLHKTLPFHTLFTDLFNPLMDTQKK
KQPVGPRRKVGPHGRGNLTPHEAKRNIVERFIANWRKQVGNDFYPAMRLIIPEKDRERAM
YGLKEKTIAKILIKLTRIGKDSDDAKHMLNWKLPSQLQKAPTWTAGDFAGRCYEILSSRQ
LKTEYSDMSIAEVNNALDKLSQVGTEEEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGA
TEKTLLDIWHPDAETLFNVSSNLRRVCWELFDHNIRLEGENTGLSLMQCFQPQLAQFQDK
VGSFQKMVTRFKGDSDDDTFWIEEKLDGERMQLHMVEDSDAPGGRSFGFWSRKAKDYTYL
YGKHFHGDEAGALTRFVTEAFGKNVRNIILDGEMVTWDMETDHIVGFGTLKTAAISEKEN
KTNQETGQRPLFRVFDCVYLNDTLLTQYTLRDRRRALESAVKGVHRRLEVHPYIEARSHT
EIEPALRKVVAEASEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFG
SGRRGGAHSSFLCALLTNKSAKPGDPKHEHCWSFFKVGGGFSSDDYAALRGRTQGKWHDW
DPRRPPPFIELGGHEQNRQHERPDQWIRPSDSVVLECKAASVESSDKFRLALTLRFPRFK
QLRTDKRWDQALSVQEFLEVKTKIEIEKSEKEKEFKIEQSRRKKARTSKKPLAVMGNDTV
TTPYAGPESKIFDGLSFYVMTEQVHPMKKSKADLEALIKANGGKLVQRDSTDKNLIIIAD
KRLIKVVSLEKRATNNIVKPIWIQDCITQSEADTGALPYLLPFEPNRHMFYLHDDDQFEI
ESNVDENGDSYARDIADVEEMRKLLDGMMKPESPATFQRQEFLKQLEDHSKPLEQLKTHM
FHSVKAVFPDDVDSEEWSLKAQLAKNYLRFGDGLIADNEEEEGVTHIVVPDERSMPKRLN
PRISGLARIVGIGWVEKCWEEGTRLDEERFQWG
NT seq 2982 nt   +upstreamnt  +downstreamnt
atggtagaagatacgccaatgccagatacagacgccgtacgggaaaacaccctcatgtac
ggccatgatgacgacctggacgagaaatacccgctgcggcctttgaatttacacaagaca
ctgccgtttcacacattgttcaccgatcttttcaacccgctcatggacacgcaaaaaaag
aagcagccggttggcccccggcgcaaggttggaccgcacggccgcggcaacctaacgcca
catgaagccaagcggaacatcgtcgagcgctttattgcgaattggcggaagcaggtgggg
aatgacttctatcctgcaatgcgtctcattatccccgagaaagaccgagagcgggcaatg
tatggtttgaaagagaagacaatagcaaaaatcttgatcaagctcaccagaattggcaag
gattcagatgatgcgaagcacatgctcaactggaagttacctagtcagctgcaaaaggca
ccaacttggactgctggcgactttgccggacggtgctatgagattctatcgtcacgtcag
ctcaagacagagtacagcgacatgagcatcgcggaagtcaacaatgctctcgacaaatta
tcgcaggtcggtaccgaagaggagcaagttaaaatcttccagagattttatcggagaatg
aatgccgaggaaatgacgtggcttattcggatgattcttcgtcagatgaaaattggcgcg
actgagaagaccttgcttgatatttggcatccagatgcagaaacgctattcaacgtgtca
tcaaatcttcggcgtgtttgttgggagctttttgatcacaacatacgtcttgaaggcgag
aatactggtcttagtctcatgcaatgcttccaaccgcaactagctcaatttcaggacaaa
gtaggctcgttccagaaaatggttaccaggttcaaaggagattcagatgacgatacgttc
tggattgaggagaaactggacggcgaacgcatgcaactacatatggtagaggactcagat
gcgccaggcgggagatcgtttggcttctggtcgcgaaaggcaaaagactacacttatctc
tatggaaagcatttccacggcgacgaagctggagcactcacgcggttcgtaacagaagca
tttgggaagaatgtgaggaacattatcctcgatggcgaaatggttacctgggacatggaa
actgatcacatcgttgggtttggtactctcaagacggcagccatatctgaaaaggagaac
aaaacaaaccaagagactggccagcgaccattgtttcgagtgtttgactgtgtatatctg
aacgatacgttgctcacccagtatacgcttcgtgatcgccgtcgtgctctggaaagcgct
gtcaaaggtgtacatcgcagattagaagtccatccatatattgaggcgcgttcgcatact
gagatcgagccggcgctgcgaaaagtggttgctgaagcatccgagggcttggtgttaaag
aaccctcgctcaatgtattgcttgaaccaacgaaacaacgattggatgaaggtgaagccg
gagtacatgtccgagtttggagagtctcttgactgcattgtcgtgggagggtactttggc
tctggccgtcgcggtggtgcccactcatcttttctctgtgcgttactgacgaacaagagc
gcaaagccaggagaccccaaacacgaacattgttggtcattcttcaaagttggtggtgga
tttagctcggacgactacgctgctttacgaggacgaacgcaaggaaaatggcatgactgg
gatcctcggcgtccaccgccattcatcgaactaggtggccacgagcagaatcggcaacat
gagagaccggaccaatggattagaccaagtgactctgtcgtactggagtgcaaagctgcc
agcgtcgagagcagcgacaagttccgcttggcattgacactccgctttccgcgcttcaag
cagctcaggacagacaaacgatgggatcaggcgctttccgtgcaggaattcctggaagtc
aaaactaaaatagagatcgagaagtccgagaaagagaaggaattcaagatcgaacagtca
cgacgcaagaaggcgcgcacatcgaagaagccgctggcggtgatgggcaacgatacagtg
acgacgccttatgcaggcccagagtctaaaatcttcgacggactcagcttctatgtcatg
actgagcaggtgcacccaatgaagaaatctaaagccgacctagaggcactgatcaaagcc
aacggtggcaagcttgtccaacgcgactctacagacaagaatctcatcatcattgccgac
aaacggctgatcaaagtcgtgtcgctggaaaagcgagctacaaacaacatcgtcaagcca
atctggatccaagactgtattacgcaaagcgaagcagacactggcgcactgccctaccta
ctcccttttgaaccgaataggcacatgttctacctccacgatgacgatcaattcgagatt
gagagcaacgtagatgaaaatggcgattcttatgcacgcgacattgcggacgtggaagag
atgaggaagttgctggatgggatgatgaaaccggaaagtccagctacgttccagcgacaa
gaatttttgaaacagttggaagatcatagcaagcctctggagcagctgaagactcatatg
tttcactctgtcaaagctgtttttccagatgatgtggatagcgaagaatggtcgttgaag
gcgcaactggcgaagaactatctccgttttggagatgggctgattgctgataacgaggaa
gaagagggagtcacgcacatcgttgtaccagacgagagatctatgcccaagagattgaat
ccgagaatctctggacttgctcgaatagttggtataggatgggtggaaaagtgctgggaa
gaaggtacaaggttggatgaagagagatttcaatggggttag

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