KEGG   Bipolaris zeicola: COCCADRAFT_86870
Entry
COCCADRAFT_86870  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bze  Bipolaris zeicola
Pathway
bze03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    COCCADRAFT_86870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_86870
Enzymes [BR:bze01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     COCCADRAFT_86870
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     COCCADRAFT_86870
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N
Other DBs
NCBI-GeneID: 19152247
NCBI-ProteinID: XP_007708793
JGI: 86870
UniProt: W6YGY1
LinkDB
Position
Unknown
AA seq 883 aa
MSLTFNAICSLLQDVENISTNGPRPPSKQEQEVIQQAVSEWFQNQRAAIDDPDTDGGAVL
SILLPHQRKDRVYGLQAPLLAKKLARLLTFSHGQRTLFESWKTGTYGDLGAYVERAMKPW
DGTFSSKPHITIKRVNCLLVQLAAGCRFSDEKTRRLRDPGFNIDNELKSIITRLESWEAK
WLVRLLLRDYCTIELDERVVTRHYHFLLPELLAFQNDYEAAFDVLKGELSSYPAVPESWE
EEPMRVEAAKRPKARVGVKIGRPTFLKAWSFSNCLKLVGDGVWAAEVKYDGEYSEIHVDL
ENENSNLRIFSKNGKDATADRTALHGTIRSALRIGQPDALFKKNCIVTGEMVVYSDKEKK
ILPFSKIRKYVTRSGSFKVTLNSSAVHQQEHLMIVFFDVLTIDDEPVLRHCLEDRRKILH
KLIHAVPGRSMLSEWTLLDFKTGNGITDLKQTFARTLADRQEGLVLKPLQAPYLPLLSEQ
GHRQTGFFIKVKKDYLADMGSERDLGDFAVIGASFDAQAATKTTLKPLHWTHFYLGCCIN
RDVVLLTGAKPRFTVVASLSVEKCIPRSDAKYLNIQGYIRQTTLHEGGATTEFDMINLRD
HYYYSRRMTVAFRSPLIVEILGGGFDRLPHASFEMLRHPRVTKIHHDRSWEDAVTMQDLE
RMAKEKFSVPDADKLDGHARDVALLVEKYARERKGSQDTAATECTTKKSQRMSPCLLQET
PRSPPTEAESPVSSGGSEVQKMQFDTDTDIDTDASSSDGSADKSVQAKGIRASRELRSCK
ATLKKVSALAPDPQSLTAPEVASSTVSDTSLLSGVVTSKRRSLVEPISPPKIKRRKSRCP
LQALDGNRQVSRLDLDLDMGKQSGCISGGEGTEDENRLSKEEE
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgagtctcacattcaatgctatctgtagcctattgcaagacgttgagaatatttccacg
aatggaccacgaccaccttcaaagcaggaacaagaggtcatccaacaggctgtttcggaa
tggttccaaaaccagagagctgccattgacgatccagatacggatggcggagctgtgctc
tccatcttacttccgcaccaaaggaaagaccgcgtgtacggtttgcaagcgcccttgctc
gcgaagaaactcgcacgcctactcaccttcagtcatggacagcgcacgctattcgaaagc
tggaagacgggcacctatggcgacctgggcgcatacgtcgaacgcgccatgaagccttgg
gatggtaccttttccagcaaaccacacattacaatcaaaagagttaactgcctgttggtg
caattggcggccggttgtagattctcggacgaaaagaccagaagacttcgtgatccgggg
tttaacatcgacaacgaacttaaaagtatcatcacgaggctcgagtcgtgggaagcaaaa
tggttagtccgccttctacttcgagactactgcactatcgaattggacgaaagagttgta
acgcggcactatcactttctgttaccggagctattggcgtttcagaacgactacgaggca
gcctttgatgtactcaaaggtgaacttagttcttatccggccgtacctgagtcgtgggaa
gaggaacccatgcgcgttgaggcagcgaaaagaccaaaggctagggtcggtgtcaagatt
gggcgaccgaccttcctaaaagcatggtcgttcagcaactgcttgaagcttgttggcgat
ggcgtctgggctgccgaagtcaaatacgacggcgagtattccgagatccacgttgatttg
gaaaatgaaaatagcaacttgcgaatcttctccaagaatggcaaagatgcaactgcagat
cgtactgctttacacggcacaatccgcagtgctcttcgtataggccagccagatgccttg
ttcaaaaagaactgcatcgttaccggtgaaatggtggtatacagcgacaaggagaagaag
atactgccattctccaagattcgcaagtatgtcacgcgctcaggatccttcaaagtcaca
ttaaacagctctgcggtgcatcaacaggaacatctcatgattgtcttctttgacgtctta
actatagatgatgagcccgttttgcgtcactgcctcgaggaccgccgcaaaattcttcac
aaacttatccatgccgtaccgggtcggtccatgctctcagagtggaccttgttggatttt
aagacagggaatggtataacagaccttaaacagacattcgcccgcaccctagccgatcgc
caagaaggattggtactgaaaccgttgcaagcgccctatctgcccttgctatctgagcaa
ggccaccgtcaaacaggtttcttcatcaaggtcaagaaggattatctagctgatatgggc
agtgagcgagatttgggcgacttcgctgtcattggagctagttttgatgcgcaggctgca
acgaagacgactctaaagcctctacactggacgcacttttacctaggatgctgcataaac
agggatgtggtcctactgacaggggccaagcccaggttcactgtcgtcgctagtttgagc
gttgaaaagtgtatcccaaggtctgacgcaaagtacctgaacatccagggctatatccgt
cagaccactttgcatgagggtggtgccactactgaatttgacatgataaatctcagggac
cactactactatagccggcgtatgactgtcgcctttagaagccccttgattgttgagatt
ctggggggaggcttcgacaggttgcctcatgcgtcatttgagatgctacgtcatccgcgg
gttacgaagattcaccatgataggtcgtgggaggatgcggttaccatgcaggatctggag
cgcatggcgaaggagaaattttcagtgcctgatgcggataagcttgatgggcatgcgaga
gatgttgctttgttggttgagaagtatgccagggagagaaaggggtctcaggatactgct
gctacggagtgtacgacgaagaagtcacagcggatgagtccttgtcttttgcaagagacg
ccgcggagtccacccacagaggctgaatcccctgtgtcatctggtggttctgaggtgcag
aagatgcaatttgatactgacactgatattgatactgacgcgtcgagttctgatggttct
gctgacaaaagtgttcaggccaagggtatacgcgcttcccgcgaattaaggtcatgcaaa
gctactcttaagaaagtgagtgccttggccccagacccacagagtctgacggcaccagag
gtggctagctcaactgttagtgacaccagcctgctatctggtgttgtgacaagcaagagg
cggagcctcgtcgaacccattagtccgccgaagattaaacggagaaagagccgctgtcca
ctacaggctttggatgggaatcggcaggtgagccgcttggatctggacttggacatgggt
aagcagagcggttgtatatccgggggagaaggaacagaagacgaaaataggctgtcgaaa
gaagaagaatag

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