Coraliomargarita akajimensis: Caka_3066
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Entry
Caka_3066 CDS
T01204
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
caa
Coraliomargarita akajimensis
Pathway
caa00300
Lysine biosynthesis
caa00550
Peptidoglycan biosynthesis
caa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Caka_3066
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Caka_3066
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caa01011
]
Caka_3066
Enzymes [BR:
caa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Caka_3066
Peptidoglycan biosynthesis and degradation proteins [BR:
caa01011
]
Precursor biosynthesis
Amino acid ligase
Caka_3066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADE56079
UniProt:
D5EI39
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All DBs
Position
3679444..3681045
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AA seq
533 aa
AA seq
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MIGLADFQISTLLHAASARSGYSRLFANKSSRDARTPLNPNVGDLIQGLELRLRKGKLDR
EVTCLITDSRRVVPGALFFAIGGLRTDGNYYIEEAVDRGAVAIITEQDLGSHFPIDYIQV
EDVRMALAVVAREFYGRPDERLGLTGVTGTNGKTTVSMLVQHLIGGDDKVGLIGTIRYDI
GPRTLPSFRTTPESVDVYALLSQMEDGGCKDAVMEVSSHGVDQKRVYGLDIDVAVFLNLT
QDHIDYHKSMEAYYEAKKGLFIGRAGAVPHSAVVNMDCAYGRRLLTELPGDVRALTFGEH
ADAQVRAEKVRLLADHTEFELYWPGGQATVVSPLLGRYNVSNLLAALATGWAKGFEIEHL
VKRIPSFRGVPGRMELIHEKQPYNVLVDYAHTDDALKNATGMLREITPGKLIVVFGCGGD
RDRSKRSLMLKATLEHADQIFATSDNPRSESVEQIFEDMRLGNETSLDRVEFIEDRKHAI
SRALDAAQAGDCVLIAGKGHESFQEFDGSVVPFDDRQVARELIQLKSFNQGAS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtctcgccgactttcaaattagcacgctactccatgctgccagtgctcgctcc
ggatactctcgactctttgccaataaatccagtcgcgatgcacgcacgccgctgaacccg
aacgttggtgatctgattcagggcttggagctacgtttgcgcaaaggaaaactcgatcgc
gaggtgacgtgcctgattactgacagtcgtcgtgtggtgcctggcgcactgttctttgcg
attggtggtctgcggacagacggtaattactatatcgaagaggcggtcgatcgtggtgcg
gtggcaatcattacagagcaggaccttggctcgcactttcccattgattatattcaggtc
gaggatgtgcgcatggcactcgctgttgtcgcgcgcgagttttatggtcgtccggatgag
cgcttgggactcaccggtgtgaccgggaccaatggtaagacaacggtttcgatgctggtg
cagcacctcatcgggggggatgataaggtcggtctgattggaaccattcgctacgatatt
ggaccgcgtaccttgccttcttttcgcactactccggaatcggtggatgtgtatgcctta
ctgagtcagatggaggatggcggctgtaaagacgcagtgatggaagtgagttcacacggt
gtggatcaaaagcgtgtctatggtttggacatcgatgtcgccgtcttcttgaacctcact
caggaccacattgattatcacaaatcaatggaggcgtactacgaagcgaagaagggactc
ttcattggccgggccggggcggtgccgcactcggccgtcgtcaacatggactgtgcgtat
gggcgacgtctgctcactgagcttccgggcgatgtgcgagcgctgaccttcggggagcat
gcagatgcgcaggtgcgtgcggagaaggtgcgtcttctcgcagaccataccgagtttgaa
ctgtactggccgggaggccaggccacggtggtctctccgctgctgggccgctacaatgtg
agtaacttactcgccgccttggcgaccggttgggccaagggctttgagattgagcatctg
gtgaagcgcattccgtcctttcgtggtgtgcccggtcgcatggagctgattcatgaaaag
cagccgtataatgtgctggtggattatgcccacaccgatgacgccttaaaaaatgcaacc
gggatgctgcgggagattacacccggcaaactcattgtggttttcggctgtggtggagat
cgcgaccgtagtaagcgctccttgatgttgaaagccacattggaacatgccgatcagatc
tttgccacatcggataatccgcgctccgagtcggtggagcaaatcttcgaggatatgcgc
ctcggaaacgaaaccagtctggaccgtgtggagtttatcgaagaccgtaagcacgcgatc
tcacgggctctggatgcagcgcaggccggtgactgtgtgctgattgccggaaaggggcac
gagagtttccaagagtttgatggttcggtcgtcccatttgatgaccgtcaggtggcccgc
gagctgatccagttgaaatccttcaatcagggagcgagctag
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