Caballeronia sp. SBC2: SBC2_55640
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Entry
SBC2_55640 CDS
T06459
Symbol
prpD
Name
(GenBank) 2-methylcitrate dehydratase
KO
K01720
2-methylcitrate dehydratase [EC:
4.2.1.79
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00640
Propanoate metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
Module
caba_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SBC2_55640 (prpD)
Enzymes [BR:
caba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.79 2-methylcitrate dehydratase
SBC2_55640 (prpD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-ProteinID:
QIE27490
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All DBs
Position
pSBC2-2:complement(119392..120843)
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AA seq
483 aa
AA seq
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MSAPISNVRPEPDRVLVDIVDYVLDYKIDSTLALDTARNCLIDTLGCGLEALTYPACTKL
MGPIVPGTIVPNGAKVPGTSFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGI
LATADWLSRSAVATGKKPLSMKDVLIAMIKAHEIQGCIALENSFNKVGLDHVLLVKLAST
AVVGQMIGLTRDELINAVSLAFVDGHSLRTYRHAPNTGSRKSWAAGDATSRAVRLALIAK
TGEMGYPSVLTAKTWGFYDVLFKGNEFKFQRPYGSYVMENVLFKISFPAEFHSQTAVEAA
MTLHAKLTETGKKVEDIKKITIRTHEAAIRIIDKKGPLDNPADRDHCIQYMIAVPLIHGR
LTALDYEDSVAKDQRIDTLRAKMECVEDPQFTKDYHDPEKRSIANALTVEFNDGSQFDEV
VVEYPIGHKRRREDGIPLLVEKFRTNLARRFPAKQQEAILAVSLDQATLEAMPVNEYVDL
YVI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccgatttccaatgtccggcccgagccggaccgagtactagtcgatattgtc
gactacgttctcgactacaagatcgacagcacgctcgcgctcgacacggcgcgcaactgc
ctgatcgatacgctcggctgcggactcgaagcactgacctatcctgcatgcaccaagctg
atgggacccattgtgcccggcacgatagtccccaacggcgccaaggtgcctggcacctct
ttccagctcgacccggttcaggctgcgttcaacattggcgcgatgatccgctggctcgac
ttcaacgacacatggctggctgccgaatggggccatccgtcggacaatctcggcggtatt
ctggcaacggccgactggctctcgcgtagcgcggtggccaccggtaagaagccgctgtcg
atgaaagacgtcttgatcgcgatgatcaaggcgcacgaaattcaaggctgtatcgcgctg
gaaaactcgttcaacaaggtcggtctcgatcacgttttattggtcaaactggcatccacg
gccgtcgtcggtcagatgatcgggttgacgcgcgatgagttgatcaatgccgtatctttg
gccttcgtcgatggtcattcgctgcgcacgtatcggcacgcgccgaatacgggctcgcgc
aagtcgtgggcagcgggtgacgcaacttcgcgcgccgtacgtctcgcgttgatcgcgaag
acgggcgagatgggctatccgtcggttctgaccgctaaaacatggggtttttacgacgtg
ctcttcaagggcaacgagttcaagttccagcgtccgtacggttcgtacgtgatggaaaac
gtgctgttcaagatctcgtttccggctgagttccactcgcaaacggccgtggaagcggca
atgaccttgcacgccaagctcacggaaaccggcaagaaggttgaagacatcaagaagatc
acgatccgcacgcacgaagcggcgattcggattatcgataaaaagggtccgctcgataac
cccgccgaccgcgatcactgcattcaatacatgatcgccgtgccgttgatccatggtcgc
ctgaccgctctggattatgaagattcagtagcgaaggatcagcgcatcgacaccttgcgc
gccaagatggaatgcgtggaggacccgcaattcacgaaggattatcacgatccggagaag
cgttctatcgctaatgcgctgaccgtcgagttcaacgacggcagccagttcgacgaagtg
gtcgtcgaatatccgattggacacaaacgccgtcgcgaagacggcatcccccttctggtc
gagaagttcaggaccaaccttgcacggcgtttcccagccaagcagcaagaggcgatcctc
gcggtatcgctggatcaggcaacgctcgaagcaatgccggtcaatgaatacgttgatttg
tacgtgatttag
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