Caballeronia sp. SBC2: SBC2_55680
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Entry
SBC2_55680 CDS
T06459
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00020
Citrate cycle (TCA cycle)
caba00270
Cysteine and methionine metabolism
caba00620
Pyruvate metabolism
caba00630
Glyoxylate and dicarboxylate metabolism
caba00680
Methane metabolism
caba00710
Carbon fixation by Calvin cycle
caba00720
Other carbon fixation pathways
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
Module
caba_M00009
Citrate cycle (TCA cycle, Krebs cycle)
caba_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
caba_M00012
Glyoxylate cycle
caba_M00168
CAM (Crassulacean acid metabolism), dark
caba_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SBC2_55680 (mdh)
00620 Pyruvate metabolism
SBC2_55680 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
SBC2_55680 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SBC2_55680 (mdh)
00720 Other carbon fixation pathways
SBC2_55680 (mdh)
00680 Methane metabolism
SBC2_55680 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SBC2_55680 (mdh)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SBC2_55680 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QIE27494
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All DBs
Position
pSBC2-2:complement(123913..124899)
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AA seq
328 aa
AA seq
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MAKSAKRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELED
CAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEV
ASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAGKSGKPVASIE
KLAVWGNHSPTMYPDFRFATVEGESLTKLINDDEWNRNTFIPTVGKRGAAIIEARGLSSA
ASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYEIPEDIIYGVPVTCENGEYKRVEGLEI
DAFSREKMTGTLNELLEEREGVAHLLGK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtccgcaaagcgcgttgccgtcacaggcgccgcaggtcaaatcggttactcg
ttgctgttccgcatcgccaacggcgacctgctgggcaaagaccagccggtcatccttcag
ttgctagacctgccgcaggcgcaaggcgccgtcaagggcgtagtcatggaactggaagac
tgcgcgttcccgttgctggccggcgtggttgtcaccgacgacccgaaggttgcattcaag
gacgccgacgtcgcgttgctggtcggcgcccgtccccgttcgaagggcatggagcgtaag
gacctgctgtccgccaacgccgagatcttcacggtgcaaggcaaggcgctcaatgaagtg
gcaagccgcgacgtgaaggtgctcgtggtaggcaacccggccaacacgaacgcgtacatc
gcaatgaagtcggcgccggatctgccgaagaagaacttcacggccatgctgcgcctggac
cacaaccgcgcgctgtcgcaactggcaggcaagtcgggcaagccggtcgcatcgatcgaa
aagctggccgtgtggggcaatcactcgccgaccatgtacccggatttccgtttcgccacg
gtcgaaggcgagtcgctgaccaagctgatcaacgacgacgaatggaaccgcaacacgttc
atcccgaccgtcggcaagcgcggcgcggcgatcatcgaagcgcgtggcttgtcgtcggcg
gcgtcggcagctaacgcggctatcgaccatgtgcgcgactgggtgctgggcacgaacggc
aagtgggtcaccatgggcattccgtccgatggttcgtacgaaatcccggaagacatcatc
tacggcgttcccgtgacgtgcgaaaacggcgaatacaagcgcgttgaaggcctggaaatc
gacgcgttctcgcgcgagaagatgaccggcacgctgaacgaattgctcgaagagcgtgaa
ggcgtggcgcacctgctgggcaagtaa
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