KEGG   Caballeronia sp. SBC2: SBC2_71160
Entry
SBC2_71160        CDS       T06459                                 
Symbol
virD4
Name
(GenBank) Protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
caba  Caballeronia sp. SBC2
Pathway
caba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:caba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SBC2_71160 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caba02044]
    SBC2_71160 (virD4)
Enzymes [BR:caba01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SBC2_71160 (virD4)
Secretion system [BR:caba02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   SBC2_71160 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: QIE29040
LinkDB
Position
pSBC2-3:complement(6703..8712)
AA seq 669 aa
MANHLRILVSALAAAGVAAVAVGGQFAGAALFAKMQHLPPSVIGIFTLRDYWHAYGDVPA
VKKALAACSFVSVAIPVGAIAAVCFAAFGTAKRELHGSARFAKAHEIRKTGLLDNEDGKP
ALIIGKYRGKYLTFPGQQFVMLAAPTRSGKGVAVAIPNLLTYPDSMVVLDLKLENYKFTS
AYRQKYGQKVYLWAPFAEDGKSHGWNVFDSIANRPEHLRIGDVQAIGLKFYPTNVEAKTK
FWNDLARNLFVGLSLYLMETATRERYCTLGEIFRQSSGMGKPIKEHIAQLRATKGLSEAC
TGALNRFLASGDEVLSSILSTFNAPLLIFDNPIVDAATSHSSFDINEVRGQRMTIYIGIQ
PNRLDDAGLLVNLFFSQLIDLNTSVLPEHDPSLKYQCTLVLDEFTAIGKVNIIDTSNAFI
AGFNLRLLTIIQAISQMERPSLYGKEGTRTLVVNHAAKVVYPPKDHGEAKDLSDALGFFT
ETSVSKSRTPGKPRGENHSDQRRALMMPQELEEMSQDEQILMGFGRPIRCKKAFYYTDPL
FVNRLKEMSSSLRALDEKLPTETQLKAAAGANELCTSDVPIIDPIEWQAKRRAATAARRP
DGTRVARATDLAAMCDADVSVALVAALADGIYADLLELTGIQFNFADTVSQASVPDRSRS
PIQEEMTHG
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcaaaccatttaagaatcctcgtgagcgcgctggcggccgccggcgtagcggccgtc
gcggtagggggccagttcgcgggcgccgcactcttcgcgaagatgcagcacttgccgccg
tcggtgatcggcatctttacgctgcgcgactattggcacgcatatggcgatgtacccgcg
gttaagaaagcgctcgctgcatgttcgtttgtgtctgtggcgattcccgttggcgcgatc
gctgcagtctgcttcgccgcgtttggaacggcgaagcgcgagcttcatggcagcgccagg
tttgcaaaggcgcatgagatccgcaagactgggttgctcgataacgaagacggtaagccg
gcactcattattgggaaatatcggggcaaatacctgaccttccccggccagcaatttgtc
atgctcgccgcgccgacccgttccggcaaaggtgtggcagtcgcaatcccgaaccttctc
acctatccggattcgatggtcgtgctggacttgaagcttgagaactacaagttcacgtcc
gcctatcggcagaaatacgggcagaaggtgtacctctgggcccccttcgctgaagacggc
aaatcacatggctggaacgtcttcgactccatcgccaatcgaccggagcatcttcgcatt
ggcgacgtgcaggcgatcggcttgaaattttatccgaccaatgttgaggcgaaaaccaag
ttctggaatgacctcgcacgcaatctgttcgtgggcctgagcctttatctcatggagacc
gcgaccagagagcgttattgcacgctcggcgagatctttcgccagtcgtcgggcatgggt
aagccgattaaagagcatatcgcgcagctgcgagctacaaagggtctgtccgaggcgtgc
accggtgcattgaatcgcttcctggcatctggcgatgaggtgttgtcgtcgatcttatcg
accttcaatgcgccgctgctgattttcgataacccaatcgtcgacgccgcaaccagccat
tcatcattcgacattaacgaagtgcgcggccagcgcatgacgatttacatcggcattcag
ccgaaccggctcgacgatgcgggattgctggtgaacctgtttttctcacagctgatcgat
ttgaacacatcggtcttacctgagcacgatccgtcgctcaaataccaatgcacgttggtt
ctagacgagttcacggcgatcggcaaggtaaacatcatcgatacatcgaacgcctttatc
gcgggcttcaacctgcgactgttgacgattatccaagcgatttcgcagatggagcggccc
tcgttgtatggcaaagaaggaacgcgcacgctggtggtgaaccatgccgcgaaggtcgtc
tatccacccaaggatcacggcgaagcgaaggacctttccgacgcgctcgggtttttcacc
gaaacgtcggtatcgaaaagcaggacgccaggtaagccgcgcggtgagaaccattcggac
cagagacgcgcattgatgatgccgcaggaactcgaggagatgtcgcaggacgagcaaatc
ctgatgggtttcggcaggccaatccgctgtaagaaagctttttactataccgatcccctc
ttcgtgaaccggctcaaggagatgagctcatcgctgcgtgccttggacgagaaactgcct
accgagacgcaacttaaggcggcggccggcgcaaatgagctctgcacgagtgatgtgccg
atcattgatccgatcgaatggcaggccaagcgccgtgccgcgaccgcggcacggcggccg
gacggtacacgagtcgcacgcgccacagatctcgccgcgatgtgtgatgccgatgtgtcg
gttgcgctcgtggctgcgcttgcggatggaatctatgccgacctgctggaactgaccggc
attcaattcaactttgcggacacggttagccaggcgagcgtgcctgatcgctcccgttcg
cctattcaagaggaaatgactcatggctga

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