KEGG   Caballeronia sp. SBC2: SBC2_83220
Entry
SBC2_83220        CDS       T06459                                 
Name
(GenBank) Type IV secretory system Conjugative DNA transfer
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
caba  Caballeronia sp. SBC2
Pathway
caba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:caba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SBC2_83220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caba02044]
    SBC2_83220
Enzymes [BR:caba01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SBC2_83220
Secretion system [BR:caba02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   SBC2_83220
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind euk_SelB_III
Other DBs
NCBI-ProteinID: QIE30246
LinkDB
Position
pSBC2-5:complement(82816..84873)
AA seq 685 aa
MNGRAKVLVGALATAGVAGLAVGGQYAGGTLFAHMEHLPQSVVGIFTLRDYWHAYGDIAA
VKKALALCTFASVAVPIAPIVLACVAIFSKPKRELHGSARWARDFEIRQTGLLGDDSGRA
GIILGKYKGRYLTFVGQQFVMIAAPTRSGKGVAIVIPNLLTYPDSVVVLDLKFENYRFTS
GYRAKYGQKVFLWAPFAEDGKTHGWNVFDTIVKRAPHLRIGDVQAIGQKFYSSNVEAKTK
FWNDLARNLFVGLVLYLMETATPERPCTLGEVFRQSSGMGRPVKEHIAALKATPGLSMAC
TNALNRFLASSDEVLNSIISTFNAPLLIFDNPVVDAATSHSSFDINEVRRQRMTIYLGIQ
PNRLEDAALLVNLFFSQLIDLNTSVLPEHDPSLKYQCLLVMDEFTAIGRVNIIDKANAFI
AGYNLRLLIIIQSISQMEPSLLYGKEGTRTLVNNMAAKIIYPPKDHEESKIISDTLGYLT
ESSVSTGKTRGKNLSRSENASDQRRALMMPQELAAMPQKQEILLGFDKPILCEKAYYYSD
PLFINRLKEISPSLRALGKRMPSEQQLKDAAGLETVKGNGIYELSTTDVPSVDIAAWMAK
REASTAAKGPNGERVVRASDLAEMDPASASITLVQKAAARVDEDVFALTGIRFNFSDLVA
QRYATQSVTHDAAAAPAISQEVFNG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgaacggccgcgcaaaagtgctcgtcggcgccctggcaactgctggtgtcgccggcctc
gcggtcggtggccagtacgccggcggcacgctcttcgcgcacatggagcacctgccgcaa
tcggtggtcggtatcttcacgctgcgcgactactggcatgcatacggtgacatcgcagcg
gtcaagaaagcgctcgccctctgtacgttcgcatcggtggcggtgccgatcgcgccgatc
gtgcttgcctgcgtagcgattttctcgaagcccaagcgcgaattgcacggtagcgctcgc
tgggctcgcgactttgagattcgtcagacgggtttgctcggcgacgacagcggccgtgcc
gggatcattcttggtaagtacaaaggtcgatacctgacctttgtcggccagcagttcgtg
atgattgccgcgcccacccgctcgggcaaaggcgtggcgatcgtgatcccgaaccttctc
acctatccggactcagtggtcgtgctcgatctgaagttcgagaactacaggttcacctcc
ggctaccgggccaaatacggccagaaggtgttcctgtgggcgccgttcgctgaggacggc
aagacccacggctggaacgtgttcgacacgatcgtgaaacgtgcgccgcacctgcgtatc
ggtgacgtgcaagccatcggccaaaagttctattccagcaacgtcgaagcgaagaccaaa
ttctggaacgacctggcgcgcaacctgttcgtggggctggtgctgtatctgatggagacg
gccacgcccgagcggccgtgcacgttgggcgaagtgttccgccagtcctcggggatgggc
cggccggtgaaggaacatatcgcggcgctcaaagccacgccgggtctctctatggcttgc
acaaacgcgttgaaccgctttcttgcctcgagcgacgaggtactgaattcgattatctcg
acgttcaatgcgccactgttgatttttgataatcccgtggtggatgcagcaaccagtcat
tcgtcgttcgatatcaacgaagtgcgccgccagcgcatgacgatctatctcggcatccag
ccgaaccggttggaggatgcggcgctcctggtcaatctgttcttctcgcagttgatcgac
ctgaatacgtcggtgctgcccgagcacgacccgtcgctcaaatatcagtgtctgctggtg
atggatgagttcaccgcgatcgggcgggtgaacatcatcgataaggccaacgcgttcatc
gccggctacaacctgcgcttgttgatcatcatccagtcgatctcgcagatggagccttcg
ttgctgtacggcaaggagggcacccgcacgctcgtgaacaacatggctgccaagatcatc
tatccgcccaaggatcacgaagagtcgaagattatttccgacaccctcggctatctgacc
gaatcctcggtgtccacgggcaagacacggggcaagaacctctcgcgtagtgaaaacgcc
tcggaccagaggcgggccttgatgatgccgcaggagctggcggccatgccccagaagcag
gaaatcctgctcggcttcgacaagccgatcctctgcgagaaagcctattactacagcgac
ccgctgttcatcaatcggctcaaggagatcagcccgtcactgcgtgccctcggcaagagg
atgccgagcgagcaacagttgaaggacgccgcgggtctggagacggtgaagggcaacggt
atctatgagctctcgaccaccgacgtgccgtccgtggacatcgcagcgtggatggccaag
cgcgaagcgagcacggctgcgaagggtccgaatggagagcgcgtcgtgcgggctagcgat
ctcgccgagatggacccggcgagcgcatcgatcacgctcgttcagaaggctgcagcacgc
gtcgatgaggacgtgtttgcactgaccggtattcgattcaacttttccgacctggtggca
cagcgctatgcgacgcaaagcgtgacgcatgacgcggcagcggccccggcaatttctcag
gaggtattcaatggttga

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