KEGG   PATHWAY: cabi03010
Entry
cabi03010                   Pathway                                
Name
Ribosome - Chelonoidis abingdonii (Abingdon island giant tortoise)
Class
Genetic Information Processing; Translation
Pathway map
cabi03010  Ribosome
cabi03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Chelonoidis abingdonii (Abingdon island giant tortoise) [GN:cabi]
Gene
116814713  MRPS9; 28S ribosomal protein S9, mitochondrial [KO:K02996]
116814834  RPL3L; 60S ribosomal protein L3-like isoform X1 [KO:K02925]
116814835  RPS2; 40S ribosomal protein S2 [KO:K02981]
116814898  [KO:K01981]
116815384  RPL22; 60S ribosomal protein L22 isoform X1 [KO:K02891]
116815592  [KO:K02974]
116815685  RPL13; 60S ribosomal protein L13 [KO:K02873]
116815746  [KO:K02958]
116815797  RPL37A; 60S ribosomal protein L37a isoform X1 [KO:K02921]
116816071  MRPS36; 28S ribosomal protein S36, mitochondrial [KO:K17414]
116816252  RPL21; 60S ribosomal protein L21 [KO:K02889]
116816280  [KO:K17432]
116816288  MRPL30; 39S ribosomal protein L30, mitochondrial [KO:K02907]
116816315  RPS27L; 40S ribosomal protein S27-like [KO:K02978]
116816488  MRPS6; 28S ribosomal protein S6, mitochondrial isoform X1 [KO:K02990]
116816651  RPL4; 60S ribosomal protein L4 [KO:K02930]
116816916  MRPL16; 39S ribosomal protein L16, mitochondrial isoform X1 [KO:K02878]
116817047  MRPS15; 28S ribosomal protein S15, mitochondrial isoform X1 [KO:K02956]
116817110  [KO:K17434]
116817127  MRPL37; 39S ribosomal protein L37, mitochondrial [KO:K17418]
116817188  RPL39; 60S ribosomal protein L39 [KO:K02924]
116817256  DAP3; 28S ribosomal protein S29, mitochondrial isoform X1 [KO:K17408]
116817421  RPL35; 60S ribosomal protein L35 [KO:K02918]
116817473  RPL7A; 60S ribosomal protein L7a [KO:K02936]
116817499  MRPS2; 28S ribosomal protein S2, mitochondrial [KO:K02967]
116817650  MRPL9; 39S ribosomal protein L9, mitochondrial [KO:K02939]
116818095  RPS29; 40S ribosomal protein S29 [KO:K02980]
116818405  RPS19; 40S ribosomal protein S19 [KO:K02966]
116818423  MRPL52; 39S ribosomal protein L52, mitochondrial [KO:K17433]
116818574  MRPS27; 28S ribosomal protein S27, mitochondrial isoform X1 [KO:K17406]
116818931  MRPL50; 39S ribosomal protein L50, mitochondrial [KO:K17431]
116819049  MRPS18A; 39S ribosomal protein S18a, mitochondrial [KO:K02963]
116819054  MRPL14; 39S ribosomal protein L14, mitochondrial isoform X1 [KO:K02874]
116819056  MRPL23; 39S ribosomal protein L23, mitochondrial isoform X1 [KO:K02892]
116819541  MRPL15; 39S ribosomal protein L15, mitochondrial [KO:K02876]
116819610  [KO:K02925]
116819641  MRPL35; 39S ribosomal protein L35, mitochondrial [KO:K02916]
116819696  MRPL22; 39S ribosomal protein L22, mitochondrial [KO:K02890]
116819927  RPS14; 40S ribosomal protein S14 [KO:K02955]
116819985  RPL36A; 60S ribosomal protein L36a [KO:K02929]
116820287  MRPL18; 39S ribosomal protein L18, mitochondrial [KO:K02881]
116820345  RPL27; 60S ribosomal protein L27 [KO:K02901]
116820493  RPL5; 60S ribosomal protein L5 isoform X1 [KO:K02932]
116820559  MRPL21; 39S ribosomal protein L21, mitochondrial [KO:K02888]
116820659  RPS27A; ubiquitin-40S ribosomal protein S27a [KO:K02977]
116820838  RPL30; 60S ribosomal protein L30 [KO:K02908]
116821274  [KO:K02927]
116821355  MRPS17; 28S ribosomal protein S17, mitochondrial [KO:K02961]
116821471  MRPL54; 39S ribosomal protein L54, mitochondrial [KO:K17435]
116821587  MRPL42; 39S ribosomal protein L42, mitochondrial isoform X1 [KO:K17423]
116821612  MRPL39; 39S ribosomal protein L39, mitochondrial isoform X1 [KO:K17420]
116821751  [KO:K02903]
116821791  [KO:K02942]
116822412  MRPS12; 28S ribosomal protein S12, mitochondrial [KO:K02950]
116822592  RPL36; 60S ribosomal protein L36 [KO:K02920]
116822860  MRPL40; 39S ribosomal protein L40, mitochondrial [KO:K17421]
116822978  MRPL13; 39S ribosomal protein L13, mitochondrial isoform X1 [KO:K02871]
116823000  [KO:K02917]
116823355  [KO:K02941]
116823710  MRPS14; 28S ribosomal protein S14, mitochondrial [KO:K02954]
116824240  MRPS23; 28S ribosomal protein S23, mitochondrial isoform X1 [KO:K17402]
116824576  MRPL20; 39S ribosomal protein L20, mitochondrial [KO:K02887]
116824895  RPS12; 40S ribosomal protein S12 [KO:K02951]
116824923  MRPL36; 39S ribosomal protein L36, mitochondrial [KO:K02919]
116824965  RPS5; 40S ribosomal protein S5 [KO:K02989]
116825043  MRPL2; 39S ribosomal protein L2, mitochondrial [KO:K02886]
116825264  MRPL48; 39S ribosomal protein L48, mitochondrial [KO:K17429]
116825286  RPL15; 60S ribosomal protein L15 [KO:K02877]
116825487  MRPS34; 28S ribosomal protein S34, mitochondrial [KO:K17412]
116825504  MRPL28; 39S ribosomal protein L28, mitochondrial [KO:K02902]
116825556  RPSA; 40S ribosomal protein SA [KO:K02998]
116825746  [KO:K17432]
116825863  RPS28; 40S ribosomal protein S28 [KO:K02979]
116825893  RPS23; 40S ribosomal protein S23 [KO:K02973]
116825894  [KO:K02973]
116826218  UBA52; ubiquitin-60S ribosomal protein L40 [KO:K02927]
116826373  RPS24; 40S ribosomal protein S24 isoform X1 [KO:K02974]
116826448  MRPS33; 28S ribosomal protein S33, mitochondrial [KO:K17411]
116826746  RPL22L1; 60S ribosomal protein L22-like 1 isoform X1 [KO:K02891]
116826783  MRPL47; 39S ribosomal protein L47, mitochondrial isoform X1 [KO:K17428]
116826928  MRPS35; 28S ribosomal protein S35, mitochondrial isoform X1 [KO:K17413]
116826998  [KO:K02918]
116827005  RPL14; 60S ribosomal protein L14 [KO:K02875]
116827066  RPL32; 60S ribosomal protein L32 [KO:K02912]
116827075  MRPS25; 28S ribosomal protein S25, mitochondrial [KO:K17404]
116827161  MRPL1; 39S ribosomal protein L1, mitochondrial isoform X1 [KO:K02863]
116827231  RACK1; receptor of activated protein C kinase 1 [KO:K14753]
116827325  RPL7; 60S ribosomal protein L7 [KO:K02937]
116827521  MRPL27; 39S ribosomal protein L27, mitochondrial [KO:K02899]
116827774  RPS26; 40S ribosomal protein S26 [KO:K02976]
116827974  RPS25; 40S ribosomal protein S25 [KO:K02975]
116828646  [KO:K17434]
116828756  MRPS10; 28S ribosomal protein S10, mitochondrial isoform X1 [KO:K02946]
116828798  MRPS5; 28S ribosomal protein S5, mitochondrial [KO:K02988]
116828970  [KO:K02917]
116829516  RPS18; 40S ribosomal protein S18 [KO:K02964]
116829716  RPL23A; 60S ribosomal protein L23a [KO:K02893]
116829830  MRPL44; 39S ribosomal protein L44, mitochondrial [KO:K17425] [EC:3.1.26.-]
116829846  RPL18A; 60S ribosomal protein L18a [KO:K02882]
116830224  RPL11; 60S ribosomal protein L11 [KO:K02868]
116830399  [KO:K17433]
116830571  MRPS21; 28S ribosomal protein S21, mitochondrial [KO:K02970]
116830601  [KO:K01986]
116830603  [KO:K01982]
116830626  MRPL33; 39S ribosomal protein L33, mitochondrial isoform X1 [KO:K02913]
116830642  [KO:K02925]
116830705  MRPS24; 28S ribosomal protein S24, mitochondrial [KO:K17403]
116830841  RPS15A; 40S ribosomal protein S15a isoform X1 [KO:K02957]
116831032  RPL9; 60S ribosomal protein L9 [KO:K02940]
116831188  RPS15; 40S ribosomal protein S15 [KO:K02958]
116831211  MRPL17; 39S ribosomal protein L17, mitochondrial [KO:K02879]
116831240  RPS7; 40S ribosomal protein S7 [KO:K02993]
116831277  RPS17; 40S ribosomal protein S17 isoform X1 [KO:K02962]
116831370  MRPL45; 39S ribosomal protein L45, mitochondrial [KO:K17426]
116831396  RPL19; 60S ribosomal protein L19 isoform X1 [KO:K02885]
116831402  RPL23; 60S ribosomal protein L23 [KO:K02894]
116831421  MRPL10; 39S ribosomal protein L10, mitochondrial isoform X1 [KO:K02864]
116831533  RPS4X; 40S ribosomal protein S4, X isoform [KO:K02987]
116831740  MRPL41; 39S ribosomal protein L41, mitochondrial [KO:K17422]
116831805  MRPL24; 39S ribosomal protein L24, mitochondrial [KO:K02895]
116831866  [KO:K02975]
116832104  RPL10A; 60S ribosomal protein L10a [KO:K02865]
116832123  RPS10; 40S ribosomal protein S10 [KO:K02947]
116832245  MRPL38; 39S ribosomal protein L38, mitochondrial isoform X1 [KO:K17419]
116832267  MRPS7; 28S ribosomal protein S7, mitochondrial [KO:K02992]
116832361  RPL18; LOW QUALITY PROTEIN: 60S ribosomal protein L18 [KO:K02883]
116832372  RPL28; 60S ribosomal protein L28 [KO:K02903]
116832441  MRPL4; 39S ribosomal protein L4, mitochondrial [KO:K02926]
116832485  RPS3A; 40S ribosomal protein S3a [KO:K02984]
116832547  RPS8; 40S ribosomal protein S8 [KO:K02995]
116832628  MRPL32; LOW QUALITY PROTEIN: 39S ribosomal protein L32, mitochondrial [KO:K02911]
116832728  RPS27; 40S ribosomal protein S27 [KO:K02978]
116832798  [KO:K02976]
116832854  RPL31; 60S ribosomal protein L31 [KO:K02910]
116833538  [KO:K02866]
116833570  MRPS31; 28S ribosomal protein S31, mitochondrial [KO:K17410]
116833605  [KO:K02870]
116833643  [KO:K02961]
116833794  [KO:K02979]
116833957  MRPL43; 39S ribosomal protein L43, mitochondrial [KO:K17424]
116833985  RPL8; 60S ribosomal protein L8 [KO:K02938]
116834384  RPS3; 40S ribosomal protein S3 [KO:K02985]
116834460  [KO:K02880]
116834520  RSL24D1; probable ribosome biogenesis protein RLP24 [KO:K02896]
116834592  [KO:K02900]
116834593  [KO:K02900]
116834606  MRPL34; 39S ribosomal protein L34, mitochondrial [KO:K02914]
116834651  RPS20; 40S ribosomal protein S20 [KO:K02969]
116834802  MRPS22; 28S ribosomal protein S22, mitochondrial isoform X1 [KO:K17401]
116834842  RPL38; 60S ribosomal protein L38 [KO:K02923]
116834916  RPS9; 40S ribosomal protein S9 [KO:K02997]
116835072  RPS6; 40S ribosomal protein S6 [KO:K02991]
116835897  MRPL12; 39S ribosomal protein L12, mitochondrial [KO:K02935]
116835940  RPS13; 40S ribosomal protein S13 [KO:K02953]
116835950  [KO:K02883]
116836481  MRPL19; 39S ribosomal protein L19, mitochondrial [KO:K02884]
116836671  MRPS18C; 28S ribosomal protein S18c, mitochondrial isoform X1 [KO:K02963]
116836790  RPL6; 60S ribosomal protein L6 [KO:K02934]
116836830  MRPS18B; 28S ribosomal protein S18b, mitochondrial [KO:K16174]
116836865  RPS11; 40S ribosomal protein S11 [KO:K02949]
116837080  [KO:K02868]
116837227  RPL26L1; 60S ribosomal protein L26-like 1 [KO:K02898]
116837426  [KO:K02941]
116837671  RPL34; 60S ribosomal protein L34 [KO:K02915]
116837686  RPS21; 40S ribosomal protein S21 [KO:K02971]
116837851  RPL37; 60S ribosomal protein L37 [KO:K02922]
116838189  RPLP1; 60S acidic ribosomal protein P1 [KO:K02942]
116838341  MRPL55; 39S ribosomal protein L55, mitochondrial [KO:K17436]
116838691  RPLP2; 60S acidic ribosomal protein P2 [KO:K02943]
116838755  MRPL11; 39S ribosomal protein L11, mitochondrial isoform X1 [KO:K02867]
116838859  FAU; ubiquitin-like protein fubi and ribosomal protein S30 [KO:K02983]
116838860  MRPL49; 39S ribosomal protein L49, mitochondrial isoform X1 [KO:K17430]
116838930  RPL24; 60S ribosomal protein L24 [KO:K02896]
116838976  [KO:K16174]
116839156  [KO:K02943]
116839391  MRPS30; 39S ribosomal protein S30, mitochondrial [KO:K17409]
116839736  MRPL3; 39S ribosomal protein L3, mitochondrial [KO:K02906]
116839986  RPS16; 40S ribosomal protein S16 [KO:K02960]
116840090  [KO:K02922]
116840092  RPL13A; 60S ribosomal protein L13a isoform X1 [KO:K02872]
116840124  MRPL46; 39S ribosomal protein L46, mitochondrial [KO:K17427]
116840125  MRPS11; 28S ribosomal protein S11, mitochondrial [KO:K02948]
60253674  I3K24_mgr01; 16S ribosomal RNA [KO:K26192]
60253675  I3K24_mgr02; 12S ribosomal RNA [KO:K26191]
Reference
PMID:10476961
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
PMID:10476960
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
PMID:10497122
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
PMID:10937989
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
PMID:10937990
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
PMID:11014182
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
PMID:11014183
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
PMID:25775265
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
PMID:23222135
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
PMID:23636399
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
PMID:25901680
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
PMID:20007716
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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