Chelonoidis abingdonii (Abingdon island giant tortoise): 116815821
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Entry
116815821 CDS
T07367
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi00514
Other types of O-glycan biosynthesis
cabi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116815821 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116815821 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cabi01003
]
116815821 (RFNG)
Enzymes [BR:
cabi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116815821 (RFNG)
Glycosyltransferases [BR:
cabi01003
]
Glycan extension
O-Glycan
116815821 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
116815821
NCBI-ProteinID:
XP_032620375
UniProt:
A0A8C0GVR2
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Position
13:complement(32800299..32812002)
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AA seq
402 aa
AA seq
DB search
MTLSCTGLSKICFLLSVTFCAFLLLLIPKFQTTWRHRGYPQPRPPPPFNASCKSEFHHPQ
AEPSSTGHLDSEGTDITHSVKDETVEKWGDYSLRSGGSSLKLEEQDWSPTSPLQTMLKDH
RGPADDSIKENLELQDIFIAVKTTRKYHKSRLDLLFQTWISQAKRQTFIFTDWEDRELRL
RAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPQNLLRLLSAF
SHSQDVYVGRPSLDHPIEAADHVRSDGSTTVKFWFATGGAGFCISRGLALKMSPWASLGN
FISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLRGESVLQQVTLSYGGP
ENKHNVVSMAGVFGLQQDPTRFRSVHCLLYPDTTWCPTKNIL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcctgcactggtctcagtaaaatctgcttcctgctgtccgtgaccttctgt
gctttccttctcttgctaatccccaaattccagactacctggagacacaggggctatcca
caaccccgtccaccacctccttttaatgcttcctgcaaaagtgagttccaccacccgcag
gcagagcccagctcaacaggccatttggacagtgaaggaactgatattacacacagtgtg
aaagatgaaactgtagaaaaatggggggattacagcctacggtctgggggatccagcctg
aaacttgaggagcaggattggagccccaccagtcctcttcaaactatgttgaaggaccac
cgtggacctgcagatgattccattaaggagaatctggagctgcaggatatttttattgct
gtgaaaactacaagaaagtatcataaaagtaggctggacttgctcttccaaacctggatt
tcgcaggccaaaagacagacgtttatattcacagattgggaagaccgtgaactgcgccta
agagcaggagatcacatgatcaacaccaactgctctgctgttcacacccgccaggcactc
tgctgcaagatgtctgtggaatacgataaattcctcgaatctgggagaaaatggttttgc
catgtggatgacgacaactatgtgaatccacagaatctcctgcgcctcttgtctgccttc
tcacacagccaggatgtatatgtggggaggccaagcctggaccaccccattgaggcagct
gaccatgtccggagtgatggatcaacaaccgtgaagttctggtttgccacaggtggagca
gggttctgtatcagcagaggccttgccctgaagatgagtccctgggccagcttgggtaac
ttcatcagcactgcagagagggtgcgtcttcctgatgactgcaccattggttacatcatc
gaggggctgctggaggtgaagctgctgcacagccccttgttccattcccatctggaaaat
ctgcagagactacgaggcgagtcagtgctgcagcaggtcaccctgagttatgggggccct
gagaacaaacacaatgttgtgagtatggcaggagtgtttggcttgcagcaagatccaacc
cgattcagatctgtccattgtcttctctatcctgacactacctggtgtcccactaaaaat
atactctga
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