Chelonoidis abingdonii (Abingdon island giant tortoise): 116816691
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Entry
116816691 CDS
T07367
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04514
Cell adhesion molecules
cabi04520
Adherens junction
cabi04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116816691 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116816691 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116816691 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cabi01009
]
116816691 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116816691 (PTPRF)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116816691 (PTPRF)
Protein phosphatases and associated proteins [BR:
cabi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116816691 (PTPRF)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Type II RPTP family
116816691 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
ICAM_N
Insulin_TMD
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
116816691
NCBI-ProteinID:
XP_032621999
Ensembl:
ENSCABG00000000194
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MVPNFCVPVCIVPAVVLCCLMPSAEADSKPSFMKAPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLT
VLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNGR
IKQLRSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIP
PSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSASYT
CVAMSSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPK
SWEGPFQEVDGVATTRYSIGGLSPFSEYEFRIIAINNIGRGPPSELVEARTGEQAPSSPP
LKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGS
LITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQ
ERITKYELLYWEGEDGSQRKVNFDPSSSYAVEGLKPDTLYKFQLGARSELGLGVYTPVLE
ARTAQSTPSAPPQEVECVSTSSTIIRVSWVPPPAQSRNGVITQYSIAYQAVDAEDGAKHV
VDGIGQERSSWEIKDLEKWTEYKVWVRAHTDVGPGPESSPVHVRTDEDVPSAPPRKVEVE
SLNSTAIRVSWKLPLSNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLAEAQWRAEDSI
DHETIIGGLLPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGKPSMLISTTAMNTALI
QWHPPKEMVGELLGYRLQYKRTDEEKMNIMDFEKNVHHYTVTSLHKGATYIFKLSAKNRA
GPGEEFEKEITTTEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGRITNYTVIYRDI
NSQQELTNVTRESSIMLTNLRPDTTYDIKVRACNSKGVGPLSPSIQSRTMPVEQVFAKNF
RVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTEYSFVLM
NRGSSAGGLQHRVSIHTAPDVLQSKPISTNKYMQEGKFTLTLPKVQTSAPVRWYYIVVVP
VDQSTSSRTARWRTPDEMELDQLLEAIGQGRRQRRQADRLKPYIAALVDVLPETFTLGDE
KTYKGFYNKPLSEDLSYRCFVLASLEDGETKRYAASPYSDEIVMEVSSAKQQDEPEMLWV
MGPVLAVILIIIIVIAILLFKSKQERKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLN
YQTPGSSVPSCPNISSMRDHPPIPVTDLADNIDRLKANDGLRFSQEYESIDPGQQFTWEN
SNLEVNKPKNRYANVIAYDHSRVILTSVDGVPGSDYINANYIDGYRKQNAYIATQGPLPE
TLSDFWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYT
VRTFALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCS
AGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHESLLETAT
CGNTEVPARNLFAHLQKLSQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNR
LVNIMPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWE
HNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARD
GQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF
ITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgtgtcccagtatgcattgtgccagcagtagttctgtgctgcttg
atgccttcagcggaggcagacagcaagccaagctttatgaaagctcccgaagatcagatt
gggatttctggaggagtggcctcatttgtgtgccaggcaacaggagagcccaagcctcgt
atcacatggatgaagaaggggaagaaggtcagctcccagcgatttgaggttattgaattc
gatgatgggtcaggatcagttctccggattcaacccctgcgtgttcatcgagatgaagca
atctatgagtgcactgcaaccaacagtgttggggaaataaacaccagtgccaaattaaca
gtgttagaagaagatcacctcccagccggttttccaaccattgacatgggcccgcagctg
aaggtggtagaaaaggcccgcacagccactatgctctgcgctgccagtggcaaccccgat
cctgaaatctcttggttcaaggacttccttcctgtggatacagcaactagcaatggacga
atcaagcagctccgttcaggtggtacaccaatcagaggggctctgcaaatagagaacagc
gaggagtcagaccaaggcaaatacgaatgtgttgcaaccaacagtgcaggaacccgctac
tctgctccagctaacctttacgttagagtgcggcgtgtcgcacctcgattctcgatccct
cccagcaaccacgaggtgatgcctggggggagcgtgaacctcacgtgtgtggcagtgggc
gcaccaatgccctacgtgaagtggatggctggcgtggaggaactgaccaaagaagatgag
atgcctgttggcaggaatgtcctggagttaaacaacattgtgcagtctgccagttatacc
tgcgtggctatgtcctctctaggcatgatcgaagccacggcccagatcactgtcaaagcg
ctgccgaagccaccgacggaaccactagtgactgagacaacagccaccagcgtgaccctc
acctgggactctggcaactcagaccccatctcttactatgtcatccagtacaagcccaag
tcctgggagggcccgtttcaggaggtggacggcgtagcgacaacccgctatagcataggt
ggcctcagcccgttctcagagtacgagttccgcatcattgccatcaataacatcggccgg
gggcctcctagcgaactggtggaggcacggactggagagcaggctccttccagcccaccc
ctgaaggtccaggcacggatgctgagtgccagcaccatgcttgttcagtgggagcagccc
gaggagcccaacggacagatccgaggataccgggtttactacacgacagacccccatctg
cctctgagcatgtggcagaaacacaacacagatgacagtcaccttaccactgtgggcagc
ctgataacagggaccacctacagcatccgtgtcttggccttcacctccgtgggcgatggg
cctccctccgacatcatccaggtcaaaacgcagcagggggttccagctcagccagctgat
ttccaggcagaggcagagtctgatacccggatcctgctgacatggctcccggcctcacag
gaacgcattacaaaatatgagctgctgtactgggaaggagaggatgggagtcagcgcaag
gtgaactttgacccaagctcatcgtacgcagtagaaggtctcaagcctgacacactgtac
aagttccagctgggagcccgttcggagctggggctcggggtgtacaccccagttctagaa
gccagaactgcccaatcaaccccctccgccccaccccaagaggtcgagtgtgtaagcacc
agctccactatcatccgggtaagttgggtgccaccgcctgctcagagccgcaatggggtc
atcacgcagtactccattgcctaccaggcggtggacgcagaggacggcgccaagcacgta
gtggatggaattggacaggagcgctccagctgggagatcaaggacctggagaaatggaca
gagtacaaggtgtgggtacgggcccacacagatgtggggcctggaccggagagctcgccg
gtgcatgtgcgcactgatgaggacgtgcccagtgccccaccacgaaaggtggaggtggag
tctctgaattcaacagccatccgggtcagctggaaactgccactctccaacaagcagcat
ggacagatccggggataccaggtcacttatgtgaagctggaaaacaatgaaccgcgaggg
cagcctgttatcaaagatgtcatgttagcagaagcccagtggagggctgaggactccatc
gaccatgaaaccatcataggaggccttctacctgaaaccacctattccatcactgtcgca
gcctacaccaccaaaggagatggtgcacgcagcaaacccaaagtcgtcactacgacgggg
gcagtcccaggcaagccctccatgctgattagcacgacagccatgaacacagctctcatc
cagtggcacccccctaaggagatggtcggggagctgctggggtaccggctgcagtacaaa
cgcaccgacgaggagaagatgaacatcatggactttgagaagaatgtccatcactacact
gtgaccagcctacacaaaggtgccacctacatcttcaagctgtctgccaagaacagagcc
ggtccaggggaggagttcgagaaggagatcaccacgacagaggacgtgcccagcggcttc
ccgcagaacctgcgtgtggtggggctcaccacctccaccacagaggtggcctgggacccc
ccagtgctggcggagcgaaatgggagaattaccaactacacagttatatacagagatatc
aacagccagcaggagctgaccaacgtcaccagggagtcgagcatcatgctgaccaacctc
agacctgacaccacctatgacatcaaagtgagggcctgcaacagcaaaggggtggggccg
ctcagccccagcatccagtcccggaccatgcctgttgagcaagtgtttgctaagaacttt
cgcgtcaatgctgtgatgaaaacatctgtgttgctgagctgggaagtgcctgactcctac
aagtctgcggtgcctttcaagatcctgtacaacagccagagtgtggaggtggatggccat
tcaatgaagaagctcataagcgaccttcagccggatacagaatattcctttgtgctaatg
aaccgtggcagcagcgctggtgggctccagcaccgggtatctatccacacggctcctgat
gtcttgcagagcaaacccatctccacaaacaaatacatgcaggaaggaaagttcaccctc
acccttcccaaagtccagacctcagcgccagttaggtggtactacattgtggttgtgcca
gtagatcaaagcaccagcagccgcacggccaggtggcggacgcctgatgagatggagttg
gaccagttactggaggccatcggccagggcaggcgccagcggcgtcaggcagacaggctg
aagccctatattgctgctctagtggacgtgttgccagagaccttcaccttgggagacgag
aagacctacaagggcttctacaacaagccgctctctgaggatctgagctatcgctgcttt
gtgctggcgtcgctggaggacggcgagacgaagaggtacgcagccagcccctactcggat
gagattgtgatggaagtgtcttcagcgaagcagcaggatgagcccgaaatgctgtgggtg
atgggaccagtgctggccgttatattaatcatcatcatcgtcattgctatcctgctcttc
aaaagtaaacaagaaaggaaaagagccaactccccctcgtccaaggacgaacactccatt
ggcctcaaggactccctgctggctcactcctctgaccctgtcgagatgaggcgcctcaat
taccagaccccaggttccagtgtccccagttgcccgaatatctcaagtatgcgagaccac
ccgccaatcccggtgacggatctcgctgacaacattgacaggctgaaggccaacgacggg
ctgaggttctcccaggagtatgagtccatcgatccagggcagcagttcacctgggagaac
tccaacctggaagtgaataaaccaaaaaaccgctatgcaaacgtgatcgcctacgaccac
tcacgggtcatcctgacctctgtcgatggggtgcccggcagtgactacatcaacgcgaac
tacatcgatgggtaccggaagcagaatgcttacatcgctacgcaggggccgctgccagag
acgctcagcgacttctggaggatggtgtgggagcagaggacagcgaccatagtcatgatg
acccggctggaggagaaatcccgggtgaaatgtgaccagtactggccaggccggggcaca
gagacctacgggctgattcaggtgaccctgctggacaccgtcgaactagctacctacacc
gtccggacgtttgcactctacaagaatggctccagcgagaagcgagagttacgccagttc
cagttcatggcgtggccggatcatggggtgccagagtaccccacccccatcctcgccttc
ctgcgccgggtgaaagcctgtaacccccttgacgctgggcccatggttgtccattgcagc
gctggcgtgggcaggacgggctgcttcattgtcatcgacgccatgctggagaggatgaag
catgagaagacggtcgacatctatggccacgtgacatgcatgagatctcagcgtaactac
atggtgcagactgaggaccaatacatcttcatccacgagtccttgctggagacagctacc
tgcggcaacaccgaggtgcccgcccgcaacctctttgctcacctccagaagctgagccag
gtgcccccgggtgagagcgtcactgcgatggagctggaattcaagctcctggccaactcc
aaagcacatacctcgcggttcatcagtgccaaccttccatgcaacaagtttaagaatcgc
ctggtgaacatcatgccatacgagctgaccagagtctgcctgcagcccatccgtggagtc
gagggctctgattacatcaacgccagcttcatagatggctacaggcagcagaaagcctac
attgccacgcaggggcccctggcggagaccacggaggatttctggcgtatgctctgggag
cacaactccaccatcgtggtgatgctaaccaagctgcgtgagatgggccgggaaaaatgc
caccagtactggccggcggagcgctcagcccgctaccagtacttcgtggtggaccccatg
gcagagtacaacatgccccagtacatcctccgtgagttcaaggtcaccgatgccagggat
gggcagtcacggaccatccgccagttccagttcacggactggcccgagcagggggtgcca
aagactggcgagggcttcatcgacttcatcgggcaggtgcacaaaaccaaggagcagttt
ggccaggatggacccatcacggtgcactgcagtgctggggttgggcgtacaggagtgttc
atcacgctcagcattgtcctggagcgcatgcgctatgaaggggtggttgacatgttccag
acggtgaagaccttgcgaacgcagcgaccagccatggtgcagacagaggaccagtaccag
ctgtgctacagggcagcactggagtatctcggcagcttcgaccactatgcaacgtaa
DBGET
integrated database retrieval system
