Chelonoidis abingdonii (Abingdon island giant tortoise): 116818329
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Entry
116818329 CDS
T07367
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116818329 (RAPGEF6)
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Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116818329
NCBI-ProteinID:
XP_032625034
Ensembl:
ENSCABG00000012084
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MTSPVDPKIKQALRKKPSERTQEDLNTIYSYLHGMDILSHLREHQLRIMSSSARYERYKG
NQVLFCSDTIARCWYILLSGSVLMKDSMFLPPCSFGKQSGGKRGCECIILEPSEMIVVEN
SKDNEENILQREVPFRQSRRRFRKINQRGERQTITDNVDASSYLSLPADLSKMHLTDNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESDMGDVDLTGLPEAPVDSEDDEEEDEDI
DRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFE
VVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKTESLCMGNSFGIIPSLDKQYMNGVV
RTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHIVIKA
TPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLSSPLEVGDKLLEWFKVDSLRDKVTRVVL
LWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMKGHLRLLNIACAAKAKWRQITLQKPSRD
SPLFFCLVGGSDKGFGIFVETVETGSKAAEAGLKRGDQIMEVNGQNFENITFVKAVEILR
NNTHLSITVKTNIFVFKELLSRIGQEKNGVPHIPKIAEKKSNRYSIPDMPGDMEQMFPCE
KGNKKIKANTVSGGRNRIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLAI
MPIPGSLSSSSPDLLQPTTSMLDFTNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTTA
KEVVSHAVHEFNLIGASETYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNN
METETLCSDEDAQELLRESQISLLQLSTIEVATQLSMRDFELFRNIEPTEYIDDLYKMDS
KTGNAHLKQFEDVINQETFWVATEILTEPNQLKRMKIVKHFVKIALHCRECKNFNSMFAV
ISGLNLAPVARLRGTWEKLPSKYEKHLRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLF
PVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQRKKRWRS
LGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDEE
KFQIMSLQCEPAYSTLTKNLNERKGAKSLEMSPIPMRSVGQTTKAHLHQQNRMSQVLQVP
AVNLYPIRKKGPAKDHVTFSSPQKSLSLSEEVSGKKQAEDSISMASSLHSSPPASPQGSP
HKVGNIQRSDNCGQMNLSGSSSSLASETSNKNSGQRSYGIGYALIPSTKADNFSDSSHSE
ISSRSSIVSNCSADSMSAALQDERCLPQSLIVMDSAGGVERKEVPQPSAEYSQPTTGWSL
TRPAIIRGMAVTSSMSNEEISHEHITIDAADSGRGSWTSCSSSSHDNFQNIQNQKSWDLL
SAYRHTHLDGPIAEVEPTNCCSEETYLYSETFSKNNRQSKASMEHDQSRQSWASSSSLSD
TYETNYGTIKRRGLESTAEQTEVLDSKPATDANYKTVTSSTEKGLIVYCVTSPKKDDRYR
EPPPTPPGYMGISLADIKEGSPHHPHLKPPDYSVAVQRSKMLHSDLSRLSSASLSSEPVA
CISSKMPQWHKRQPSHPKLADMTDADSEEDEDEQVSAV
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccctgtggatcccaagattaaacaggctttgcgaaaaaaaccatcagaaagg
actcaagaggacttaaatactatctattcttatcttcatggaatggacatattgtcacat
ctcagggaacatcagctaagaataatgtcttcaagtgctcgctatgaaagatacaagggc
aaccaagttcttttttgttcagacactattgccagatgttggtatattcttctttctgga
tctgtccttatgaaggactccatgtttttaccaccatgcagttttggcaagcagtctgga
ggaaaaagaggatgcgagtgtattatattggaaccttctgaaatgatcgtggtggagaat
tccaaagacaatgaagagaatatcctgcaaagagaagttcccttcaggcagtctcggcga
aggtttaggaagattaaccagcggggagaacgtcagaccatcacagacaatgtggatgct
agcagttatctttcgcttccagcagacctttccaagatgcatcttacagacaatccacat
ccacaggtgactcatgtcccttccagccagtctgggtgtagcattgccagtgactctgga
agcagcagcttatcagatatctaccaggctacagaaagtgatatgggagatgtagattta
acgggtctcccagaagcacctgtggactctgaagatgatgaagaagaagatgaagatatt
gacagaacttcagatccattactggggcgagatgttgtacgagagtgccttgaaaaagaa
cctgcagacaaaacggacgatgacattgagcaattactggaatttatgcatcaactccca
gcctttgcaaacatgaccatgtctgtaagaagagaactttgttcagttatgatatttgaa
gtggtagaacaagcaggagccatcatacttgaagatggacaagaacttgattcttggtat
gttattttaaacggcaccgtggaaatcagccatccagatgggaaaactgaaagtctctgt
atgggaaatagttttgggattatcccttctttggataaacagtacatgaatggagtggtt
agaaccaaagtagatgactgtcagtttgtttgtatagcccagcaggattactggcggatt
ctgaaccatgtggaaaaaaacactcataaagtcgaggaagaaggagaaattgttatggta
aaggagcacagagagctagatcgcagtggaaccaggaaaggacatatagtcattaaggca
acacctgagcgactcatcatgcatttaatagaagaacattctattgtcgacccaacttat
atagaagatttccttttaacgtacaggacatttctatcaagcccattggaagttggggat
aaactcctggagtggtttaaagtggacagcctcagggataaggtcaccagagtggtctta
ttgtgggtgaacaatcattttaatgattttgaaggagatcccgctatgacacgatttctg
gaagaatttgaaaaaaacttggaagatacgaaaatgaagggtcacctcaggttgttgaat
attgcctgtgccgccaaagcaaagtggaggcaaattactctgcagaaaccttccagagac
tcgccgctctttttctgtctagttggaggaagtgacaagggttttggcatttttgtagag
acagtagaaacaggcagcaaagcagcagaagctggacttaagcgtggtgatcagataatg
gaagtaaatggacagaactttgagaacattacatttgtaaaagctgttgaaatcttgagg
aacaatactcatctttccattactgtaaaaacaaacatttttgtgtttaaagagctgctt
agcaggataggacaggagaaaaatggagtcccccatattccaaaaattgcagaaaagaaa
agtaatcgctattccatcccagatatgcccggagatatggaacagatgtttccatgcgag
aaaggaaacaagaaaatcaaagcaaacactgtatctggtggaagaaacagaatcaggaaa
attttagacaagacacgattcagcatcttgcctcccaaactatttagtgatggcagtgta
agccagtcacaggatgatagtattgttggaacaaggcagtgcagacacagtttggccata
atgcctatccctggatcactctcatcaagtagtcctgatctgttgcagcctacaaccagc
atgctggattttactaatccttcagctgttggtttttactatattccagatcaagttata
agagttttcaaagcagatcaacaaagctgttacattataataagcaaagacactactgca
aaagaagttgtgagtcatgcagtgcacgaattcaacttgataggagcctcagaaacctat
tctctctgtgaggtgtctgttagtcccgagggagtcatcaaacagagaaggcttccagat
cagttctctaaattagcagacagaatccagctcaatggaaggtattatctgaaaaacaat
atggaaacagagacattatgctcagatgaggatgcccaggagctgctcagagagagtcag
atttctcttcttcagctgagcaccattgaggtggctactcagctatcaatgagggacttt
gaattatttcgcaatattgagcctactgaatacatcgatgacctctataagatggactcc
aaaacaggaaatgctcacctgaaacagtttgaggatgtcattaaccaagagacattctgg
gttgccacagaaattttaacagagcccaaccagctcaaaagaatgaagattgttaagcat
ttcgttaaaattgccctacactgtcgagaatgcaagaacttcaattccatgtttgccgtt
ataagtggactaaatctggcaccagtagcacgactcagaggtacctgggaaaagctacca
agcaagtatgaaaagcaccttagagaccttcaagatctttttgatccatctagaaacatg
gcaaaataccgcaacattcttagcagtcagagcatgcagcctccaattattccactgttt
cctgttgtcaagaaggatattacatttctacatgaaggaaatgattcaaaagtggatggc
ctggtaaattttgagaagcttagaatgattgccaaagaaattcgacaagtcgtcagaatg
acctctgctaacatggatccagctgtaatgttcagacaaaggaagaagaggtggaggagt
ttggggtctctgagccagggcagcacaaactcaaacatgcttgatgttcaaggaggtgct
cacaaaaagcgtgctcgacggagctcactccttaatgccaagaagctgtatgaggatgcc
cagatggccaggaaagtgaagcagtacctttccaatctgaatgtggaaaccgatgaggaa
aaattccagatcatgtcacttcaatgcgagcctgcatatagcactttgaccaagaattta
aatgagagaaaaggtgcaaaatccttagaaatgtcaccaatacccatgaggtcagttggt
caaaccacaaaagcccatctgcatcaacaaaacagaatgagccaagttctccaagttcca
gctgttaatttgtaccctattagaaaaaaaggaccagctaaggaccatgtcaccttcagt
tctcctcagaagtcactcagtttgtctgaggaagtaagtggtaagaaacaagcagaagat
agtatatctatggcatcctctttgcactccagtcctcccgcttctcctcagggctctcca
cacaaagttggtaacatccagaggtctgataactgtggtcaaatgaatctctctggttcc
tcctcatcgcttgccagtgaaaccagcaacaagaacagtgggcaacgcagctatggaata
ggctatgccctcataccatccactaaagctgataacttctcagactccagccacagtgag
atctcatcgcggtccagcatcgtgagtaactgctctgccgactcaatgtctgcagccctg
caggatgagagatgtttgcctcagtctcttattgtgatggattcagcaggaggagtagaa
agaaaagaagttcctcaaccatcggctgagtatagccagcctaccactggttggtcacta
actagacctgctataatcagagggatggctgtcacatcttccatgagtaatgaggagatc
tcccacgaacatatcacaatagatgctgcagacagtggccgtggaagctggacttcatgt
tcaagtagttctcatgataattttcagaatatccaaaaccagaaaagttgggatcttttg
agtgcttaccgccacactcatctagatggacccattgctgaagtagaacctacaaactgt
tgctctgaagagacttatttgtattctgaaaccttttccaaaaataatcgacagtcaaaa
gccagcatggaacatgatcaatctcggcaaagctgggcctcctcgagctctttgtcagac
acgtatgaaacaaactatgggacaattaaacggagagggctggagagcacagcagagcag
actgaggttttggactctaagccagccactgatgcaaattataaaactgttacttcaagt
acagaaaaaggcctgatagtgtactgtgtcacctcacctaagaaggacgataggtatagg
gagcctccgcccacccctccaggatatatggggatttctttagcggacataaaggaagga
tcaccccatcacccacacttaaagcctccagactatagtgtggcagtgcagaggtcaaag
atgctacatagtgacctctctagactttcatcagcttctctcagtagtgaaccagtggcc
tgtatttcatcgaagatgcctcaatggcataaacggcaaccgtcccatcctaaactagca
gatatgactgacgcagatagtgaagaggatgaagatgaacaagtatcagcagtctaa
DBGET
integrated database retrieval system
