Chelonoidis abingdonii (Abingdon island giant tortoise): 116819083
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Entry
116819083 CDS
T07367
Symbol
NECTIN2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03266
Virion - Herpesvirus
cabi04514
Cell adhesion molecule (CAM) interaction
cabi04517
IgSF CAM signaling
cabi04520
Adherens junction
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116819083 (NECTIN2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116819083 (NECTIN2)
04517 IgSF CAM signaling
116819083 (NECTIN2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116819083 (NECTIN2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116819083 (NECTIN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116819083 (NECTIN2)
04090 CD molecules [BR:
cabi04090
]
116819083 (NECTIN2)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Nectin family
116819083 (NECTIN2)
CD molecules [BR:
cabi04090
]
Proteins
116819083 (NECTIN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
C2-set_2
I-set
ig
Ig_2
Ig_VEGFR-1-like_5th
Ig_6
Ig_VSIG10L2_N
TM_ErbB1
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
116819083
NCBI-ProteinID:
XP_032626403
LinkDB
All DBs
Position
11:62835527..62866754
Genome browser
AA seq
476 aa
AA seq
DB search
MGVPRSFVFWSLLSVVLTQRVKVRNEVTGYVGDEAMLQCLFPATSPDIKVSQVTWMKEMG
GKKQNVAVYLPDHKPNFPLDNSGRIRFLNVSLQDATLIIQPLRMSDEGTYVCEFATYPHG
NEDGITTLSILARPTNTAESRKVVVGNTTIPVAICTSANGKPPAHIKWLTTLPGSYNASE
VTNGDGTVTVTSQFNMVPTAVADQQQITCVISQRTLAVPENIPVTLSVLYPPQVTIDGYD
DNWYMSRSEAVLRCTAKGNPKPTHYSWSTPSGPLPPTVQVQGDRLVVQSVDVAVNTTFIC
HVTNSVGTTRVEQTVLVRAQPNMAGAGTTGGIIGGIIATIVAVAVVATGVLIFRQQQKNR
TEQDNEDLDGPPAYKPPPPQKKIEDPEVVSNPPEAENIPLKAAYFEPSIAADPTELDLPQ
YHELPTLEDKEPAATRGPSLEDEYLDQINPIYDALSFASGEGAPEQGFIMSRALYV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgccccgcagcttcgtcttctggagcctgctgagcgtggtgctgacccagcgg
gtgaaggtccggaatgaggtcacgggctacgtgggcgatgaggccatgctgcagtgcctt
ttccccgccaccagccccgacatcaaggtcagccaggttacctggatgaaggagatgggg
ggcaagaagcagaacgtggctgtctacctcccggaccacaagcccaacttccccttggac
aacagcggcaggatccggtttctgaacgtctccctgcaggacgccacgctgatcatccag
cccttgcgcatgagtgacgaggggacctacgtttgtgaattcgccacctaccctcatggc
aatgaggacgggatcaccacgctcagcatcctggccaggcccaccaacacggcggagtcg
cggaaggtggtggtgggtaacaccacgatcccagtggccatttgcacctcagccaacggc
aaaccccccgcccacatcaagtggctcaccaccctccccggcagctacaatgcctccgag
gtgaccaacggagatggcactgtcaccgtcaccagccagttcaacatggtgcccacggcg
gtggcagaccagcagcaaatcacctgtgtcatcagccagagaacactggctgtgccggag
aacatccctgtcacgctgtccgtgctgtacccgccacaagtcactattgatggctatgat
gacaactggtacatgagccggagtgaggccgtgctgagatgcaccgccaaagggaacccc
aaacctacccattactcctggagcacgcctagtgggccgctgccccccacggtgcaggta
cagggcgaccggctggtggtgcagtcagtggatgtggcggtgaacacgaccttcatctgc
catgtcactaatagcgtggggacaacacgagtcgagcagactgtcctggtgcgagcccag
cccaacatggctggcgcgggcaccacagggggcatcatcggtggcatcattgctactatc
gtggccgtggctgtggtggccactggggtcctgattttccgccagcagcagaaaaatcgc
acagagcaggacaacgaggacctcgatgggcctccagcctacaagccgcccccgccccag
aagaagattgaggaccctgaggtggtctctaatccccctgaggctgagaacatcccactg
aaagctgcctacttcgagcccagcattgcagcggatcccacagagctggacctaccgcag
taccatgagctgcctacgctggaggacaaggagccagcggcaaccagggggcccagcctg
gaggacgaatacctggaccagatcaacccaatctatgatgccttgtccttcgcctctggg
gagggtgcccctgagcagggattcattatgtcccgggccttgtacgtctga
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