Chelonoidis abingdonii (Abingdon island giant tortoise): 116819654
Help
Entry
116819654 CDS
T07367
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04620
Toll-like receptor signaling pathway
cabi04621
NOD-like receptor signaling pathway
cabi04622
RIG-I-like receptor signaling pathway
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116819654 (TRAF3)
04621 NOD-like receptor signaling pathway
116819654 (TRAF3)
04622 RIG-I-like receptor signaling pathway
116819654 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116819654 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
ATG16
zf-C3HC4_2
FliJ
Cast
Med28
Sina_ZnF
CEP104_ZnF
MPS2
Tropomyosin
zf-C3HC4_4
zf-RING_6
ADIP
zf-RING_UBOX
Spc29
Crescentin
DUF1664
SPATA24
KxDL
T3SSipB
DUF3450
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
116819654
NCBI-ProteinID:
XP_032627473
Ensembl:
ENSCABG00000016980
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MDTNKKTEPPVSVEMVQQRANPDHTPGSIYVPEQGGYKEKFVNTVEDKYKCEKCHLILCN
PKQTECGHRFCETCINTLLSSSNPKCTACQENIVKDKVFKDNCCRRELLALQIYCRNENK
GCNELLTLAQLLMHLRNDCQFEELSCSRADCREKILRKDLPDHIEKTCKYRETTCKYCKS
QVPMITLQKHEDTDCPSVAVSCPHKCSVTSLLRSELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKIHHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIMKSSVESLQNRVS
ELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGASRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaataaaaagacagaaccccctgtgtctgtagaaatggtacaacaaagggcg
aaccctgatcacactccaggatcaatttatgttccagaacaaggaggttacaaagagaaa
tttgtaaatacagtggaggacaagtataaatgcgaaaagtgtcatctcatattgtgcaat
ccaaaacagacggaatgtggccacagattctgtgaaacctgcattaatacattgttaagt
tcttctaatccaaaatgtacagcgtgtcaagagaacatagttaaagataaggtatttaag
gataactgctgtaggagagagcttcttgcccttcagatatattgcagaaatgaaaacaaa
ggctgcaatgaactactaacactggcacaattactgatgcatttgagaaatgactgtcag
tttgaagaactttcatgctcccgtgctgattgcagagagaaaatattgcggaaggacttg
ccagaccatatagaaaagacctgtaaatatcgggagactacatgtaaatactgtaaaagc
caagtcccaatgattacattacagaaacatgaagatacagactgcccctctgttgcggtt
tcatgtcctcataaatgcagtgttacatcactcttgaggagtgagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgtaaattta
ttgaaagaatggagtaattctctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacatcatttacagcgagtg
atagacaatcaagcagagaaattgaaagaactggacaaagagatccgcccattccgacag
aattgggaggaggcagacatcatgaagagcagtgtggagtccctccagaacagagtgagt
gagctggaaagcgttgataaaactgcaggacaaggagctcgaaatacagccgtactagag
acacaactaagtagacacgatcaaatgctgagtgttcatgatattcggttggctgacatg
gacctccgattccaggtgttagaaactgccagttacaatggagtattaatttggaaaatt
cgagattataaacgtcggaaacaagaggccgtcatggggaagactctgtccttgtacagc
cagcctttttatactggatactttggctataagatgtgtgccagagtttaccttaatgga
gatggcatgggaaaagggacgcacttgtcattgtttttcgtcataatgcgaggagaatat
gatgccttacttccttggccatttaaacagaaagtgactctgatgctaatggatcaggga
gcttctcgacgtcacttaggagatgctttcaagccagatccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggttgcccagtctttgtggctcaaacagtt
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggatact
tcggatctaccagacccctga
DBGET
integrated database retrieval system
