Chelonoidis abingdonii (Abingdon island giant tortoise): 116819978
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Entry
116819978 CDS
T07367
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04010
MAPK signaling pathway
cabi04020
Calcium signaling pathway
cabi04510
Focal adhesion
cabi04540
Gap junction
cabi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116819978 (PDGFRB)
04020 Calcium signaling pathway
116819978 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116819978 (PDGFRB)
04540 Gap junction
116819978 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116819978 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cabi01001
]
116819978 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cabi04090
]
116819978 (PDGFRB)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116819978 (PDGFRB)
Protein kinases [BR:
cabi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116819978 (PDGFRB)
CD molecules [BR:
cabi04090
]
Proteins
116819978 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
116819978
NCBI-ProteinID:
XP_032628017
Ensembl:
ENSCABG00000013252
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MRPAVQLNPAMLLPSLKMLLLFLAGLLAAVSGSSKLHISPSDPEVVLNLLSSFSLTCSGE
AEVVWERDTQPIAATAEWRDGTFSSTLTLWNVTGLDTGEYVCTYNQSQNQKHPERQAVYV
FVPDPSTVFLPSGSEESFIFITGYSEATIPCRVTDPQTTVTLYEKKVENPIPVGYDRQQG
FKGFFEDKTYICRATLDEREVDSDPYYVYRIQVSSLNVSISAVQAMVRRGENITVMCTVS
GNEVVDFSWFYPRQEAGKAMEPRTDFLPGSSHDIRSTVTIQNAELEDAGTYICHVSEVYH
QNTDKKEIEINVIEHGFVRFHTDLNDVEFAEVHKSRTIQVQIEAYPQPTILWLKDNETLR
VGNSSEFAITSKNLSENRYQTTLTLVRVKQKEGGFYTVRASHEDDTQEMSFYLQINVPAN
VLLLKENSNASSGEQTVMCFTEGMPQPELMWFTCSDIKGCGTREQPTRVLENSSEEINLK
TSSMYHETLKVYRVNSMLQLRRVDEPLLIRCSVQNLLGNNFQDITLVPHGLPFKVIIISA
ILALVVVLAFIFLVILIVLWLKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDYSWELS
RDKLVLGRTLGSGAFGRVVEATAHGLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMS
HLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLLRNKHTFLQYYTEKARREMQVYG
NASEEDKVYSLTSFSVESDGGYMDMSKDDSLDYVPMSDMKGEIKYADIESSNYGTPYELD
SYSPSAPERTDRVTLINESPLLSYTDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICE
GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI
FTLGGTPYPELPMNEQFYNAIKCGYRMSKPTHASNEIYDIMQKCWEEKFEIRPSFSQLVV
LMGNLLADGYKKRYQQVEEEFLKSDHPAVLRTRPRIPGVSNAGLTHSSGTGSVLYTAVQQ
DGGDNDYIIPLPDPKPDGIDDAPQEASVSRASSTLNEVNTASTISCDSPLDLQQEGEQEE
PEPKSGCQEPSPGHHDMEESFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctgcagtgcagctgaaccccgccatgctgcttccatctctgaagatgctcctc
ctcttcctcgcaggtttgctggccgccgtgtctggaagcagcaagctgcacatttcaccc
agcgatcccgaagtcgtcctcaatctcttgagcagcttctcactgacgtgctcgggggag
gccgaggtggtctgggaacgggacacgcagcccatagccgcaacggcggagtggagagac
gggaccttctccagcacgctcacgctctggaacgtgacaggccttgacacgggggagtac
gtctgcacctacaaccaatcccagaaccagaagcacccggagagacaagccgtctatgtc
tttgtgccagacccgtccaccgtcttcctcccctcaggctctgaggaatcattcatcttc
atcaccggctacagcgaggccaccatcccgtgccgcgtgactgatcctcagaccacggtg
actctctatgagaagaaggtggagaacccaattcctgtgggctatgacaggcaacaaggc
ttcaaggggttcttcgaagacaagacctacatctgcagggcaacgctggacgagcgggag
gtggactctgacccatattacgtctacagaatccaagtctcgtccctcaatgtttccatc
agcgcggtgcaggccatggtgaggcgaggcgagaacatcaccgtgatgtgcactgtgagc
ggcaacgaagtggtcgatttcagctggttttaccctcgccaggaggctggtaaggcaatg
gagcctaggacggacttcttgcctggatccagccatgacatccgctccaccgtgaccatc
cagaacgcagagctggaggacgccggcacctacatatgccatgtatctgaggtctaccac
cagaatacagacaagaaggaaattgagatcaacgtgatcgagcatggctttgtgaggttc
cacactgatctgaatgatgttgagtttgccgaggtgcacaagagtcgcaccatccaggtg
cagatcgaggcctatccgcagccaaccatcctgtggctgaaggacaacgagaccctgagg
gtggggaacagcagcgaattcgccatcaccagcaagaacctgtcagaaaacaggtaccaa
accactctgaccctggtgcgagtgaagcagaaagaagggggattctacaccgtccgggca
tcccatgaggatgacacgcaggagatgtccttctacctgcaaattaacgtgcccgccaac
gtgttgttgctgaaggagaacagcaatgccagcagtggggagcagacggtcatgtgcttc
actgaaggaatgccccagccagagctcatgtggttcacctgcagcgacatcaaagggtgc
ggcaccagggagcagcccaccagggtcctggagaacagctcagaggagatcaacctgaag
accagctccatgtaccatgagactctgaaggtttacagggtgaacagcatgctgcagctc
cgcagggtggacgaaccgctgctcatcagatgctctgtgcagaacctcctgggcaataac
tttcaggacatcaccctggtcccacatggcttgccctttaaggtgatcatcatctcagcc
atcctggccttggtggtggtgcttgctttcatcttcctggtgatcctcatcgtcctgtgg
ctgaagaaacctcgctatgaaatccgctggaaggtgattgagtcggtcagctctgatgga
cacgagtacatctatgtggatccgatgcagctcccctacgactacagctgggagctctcc
agggacaagctagtgctagggcgcactctcggatctggagcctttggccgagtggtggag
gcaacggcccatggcctgagccattcgcaatccacgatgcgagtggcagtgaaaatgctc
aaatctaccgcaaggagcagcgagaagcaggccctgatgtctgagctgaagatcatgagc
cacctggggcctcacctaaacattgtcaacttgctcggagcctgcaccaaaggaggcccc
atctatatcataacagagtattgccgctatggagacctcgtggactatctgctccggaac
aagcacaccttcctccaatactacaccgagaaagcaaggcgagagatgcaggtgtatggg
aatgcctccgaagaggacaaggtgtacagcctcacctccttctctgtcgaaagcgacggg
ggctacatggatatgagcaaagatgactccctggactacgttcccatgtctgatatgaag
ggagagatcaagtatgctgacattgagtcttccaactacggcaccccctatgagctggac
agctattccccctcagctcccgaaaggacggaccgcgtgaccctgataaacgagtcccca
ctcctcagctacacagacctggttgggtttagtttccaggtggccaacgggatggagttc
cttgcatccaaaaactgtgtgcaccgagacctggcagcaagaaatgtcctcatctgcgag
gggaagctggtgaagatttgtgactttggcctggccagagatatcatgagggattccaac
tacatctccaaaggcagtaccttcctgcctttgaaatggatggcacctgagagcatcttc
aacaacctctacacaaccttgagtgatgtgtggtcttttgggatcctcctctgggagata
ttcactctgggtgggactccataccctgaactacccatgaatgagcagttctacaatgcc
atcaaatgtggctatcgaatgtctaaacccacccatgcttccaacgagatttatgacatc
atgcagaaatgttgggaagagaagtttgagataagaccttccttctctcagctggtggta
cttatggggaacctcctggcagatggatacaagaagaggtaccaacaggtcgaggaagag
ttcctgaagagcgaccaccctgctgttctgcgcacaaggcccagaatccccggggtcagc
aacgccgggctcacccacagctccggcaccggaagtgtcctctatacagccgtgcagcag
gatggaggggacaacgattacatcatcccccttcctgaccccaagcccgacggaatcgac
gacgcccctcaggaggcttcagtcagccgggccagttctactctgaacgaagtgaacaca
gcgtccacaatatcctgtgacagccccctggacctacagcaggaaggggaacaggaggaa
cctgaaccaaagtcgggctgccaggagccaagcccagggcaccacgacatggaagagagt
tttctgtag
DBGET
integrated database retrieval system
