KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116820339
Entry
116820339         CDS       T07367                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03440  Homologous recombination
cabi03460  Fanconi anemia pathway
cabi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116820339 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    116820339 (BRCA1)
   03460 Fanconi anemia pathway
    116820339 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cabi01009]
    116820339 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cabi04121]
    116820339 (BRCA1)
   03036 Chromosome and associated proteins [BR:cabi03036]
    116820339 (BRCA1)
   03400 DNA repair and recombination proteins [BR:cabi03400]
    116820339 (BRCA1)
Enzymes [BR:cabi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116820339 (BRCA1)
Protein phosphatases and associated proteins [BR:cabi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116820339 (BRCA1)
Ubiquitin system [BR:cabi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116820339 (BRCA1)
  Multi subunit type E3
   BRCC complex
    116820339 (BRCA1)
Chromosome and associated proteins [BR:cabi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116820339 (BRCA1)
DNA repair and recombination proteins [BR:cabi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     116820339 (BRCA1)
    BRCA1-A complex
     116820339 (BRCA1)
    BRCA1-B complex
     116820339 (BRCA1)
    BRCA1-C complex
     116820339 (BRCA1)
    BRCA complex
     116820339 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     116820339 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 BRCT_2 zf-RING_5 zf-C3HC4_3 RING_XB3-XBAT31 zf-Nse BRCT_3 zf-RING_6 zf-RING_10 zf-MIZ zf-ANAPC11 U-box Prok-RING_4 zf-RING_4 zf-rbx1
Other DBs
NCBI-GeneID: 116820339
NCBI-ProteinID: XP_032628601
LinkDB
Position
Unknown
AA seq 1901 aa
MESSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPA
QCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETSSTEL
LWKEGSIIQSKGYRNRQKRIQEQENPTLEANAGAQVADNMVRRSSLRNKRQKCESGKAVY
IEFGSDSSDDLFKKAGGGGMGDTELFQTSPRKGECEEELKYAEKESESPYNMWPLKSDAG
EILSSDILGECGVSEEDSKGIWNGIKGLEAAQVNVTEGHLKESQGISASNSQAEQCDRTA
NASSLLNEDTSLFYSAEEMDAGETPFSSKNKESGLAHSSEKQLDKSKKTGNGVQHTQAVE
TCQSESNSLHEREPALESLWQPKTLHSNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSSGS
SQDAPAGATDTEDGDSYLSDRESCISEKTDLMINCTEVVMGCENDRSLSKSIVRNTEDKI
FGKTYKRERKSNPLVHTREMPRSPKMEDVTTDVKPSSNSRASKLKRKRKTASDLQPVDFI
KKRDEKDLKKHSEGVNQCLVGRNTGRKKSGEGSTVVNGSPMGVKNGDSIPAELPLQEGKS
ILKNDTEKVTCNNTDGEPAQNTCDRKSSKKMRSSQTKRSRHSGRPVCSLQLVVDRNSSCP
DQTEMQIDSYPSSEEPRKGDSEKKRVRRSRRLQLLTEKMTKETRRRGEPNERARKHASES
KDSSSGLQRNVLVHVPECKDPDEQQDALNHGIPLSDTDLKGNDFQADKTHRNPENCSDGM
QTGEGLFYVKISMEDLNACSVVPDTDSQVCENQGSQSLLQPHSTNVDQAACPVQNLSENN
QCAATEPKKKELCAGSPKTNRHCTENDLERFRNRKSPEAKFISELNTETEDSEIDTQYLR
NMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASCVEYRHNNRDLKNEPTYVKKTVG
LDEVCEREEPKTSDFAKGISGHRPGTHLSRDTEYGHISDDGKTISQVPDQVQLFSPPRAA
TAKIKSRGRLQKRRQPKEKRISPETVIESQLSQNLNKSNGSLGDQSNIEEQIFQITDLST
MNETESNQGVKAEEVENKGPVLNLQPKPVLVHPVVCQQSPGEFSCKVIEKNGYEGECKQV
KSDKEQVFQIASVGVLECLISEEALEQPTEDTSGFPLLSETPDGLLCSAGDIKENISICE
IDRKEISAVFVKKGQEPSLRELNSGSSSSKSRSQNFVREPRRPAWKLQSSEEESSEDEEL
PCFQALIFGKSANTPLQPTKQIMSTAESSSPAEILALLNSSSGNDKAVQKTPGVSLRDTC
VSPSQESECSINLFSSQSNMSEDSTNRPQELKMPITLAPCSKEMSSSNVSREASPNGNEE
LTGRKTDLEGGHQLDRNVQPNLGEASGYDSEASHPGDSSGLFSQCEILTTQQKDAMQNNL
KKLQQEMAVLEAVLEEHGSQGFEFPPPASELPHSRVEGTLTVGQMRPARGTALISEVNLE
NHQISSSKGLSADGFHVMPSDHSNTKNKELEKEGSRSPALHLSHPKSHLLKKEALEQGHW
CPSLWKAKTHSQEGTFQQVDVAVLLEQEAVKQCNQYRIEPENAAEQEFGTKINSAAVLCG
NERRTPNSSPLKFSERLTHFQTEESTNSVAVSWSVVNGKSTQGCKQERRAFSSALHAGVV
KENAKSPVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTDMELV
CERTLKYFLGIAGRKWVVSYEWIVQSFKEGRILDEYNFEVRGDVINGRNHEGPKRARQSQ
AGKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTQKANSIAVIVAQPDAWL
ENAGCRAIQQKCTAVVTREWVLDSVACYECQEFDTYLVSQS
NT seq 5706 nt   +upstreamnt  +downstreamnt
atggagtcatctgtggctgccattggagatgtgcaaagtgtgcttttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgttcaaacttctcagcaaaaagaaaaaaggcccagct
cagtgtccactgtgtaagactgaggttaccaaaagaagtcttcaggaaaatccgagattt
aagcagctaattgaaggactactggaaactatccatgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaacctgtagaaaccagttctactgagctc
ctgtggaaggaaggttccattatccaaagtaaagggtacagaaacagacaaaaaagaatt
caagaacaagaaaatccaaccttggaagctaatgctggtgcccaggttgcagacaacatg
gtcaggaggagttccctcagaaacaaaaggcaaaaatgtgaatctggtaaagcagtatac
attgaatttggatctgattcttctgatgatctttttaaaaaagcaggtggtggtggaatg
ggagacacagaattatttcagacttcacctcgaaaaggagagtgtgaggaagaactaaag
tatgctgagaaggaaagtgaaagtccatacaacatgtggcctctcaagtcagatgcagga
gaaatactctcgtcagatatcttaggtgaatgtggtgtctcagaggaagacagcaaaggc
atctggaacggcatcaaaggtttagaggctgctcaagtgaatgtgactgaaggtcattta
aaggagagccagggcatttctgcttcaaactcacaggcagagcagtgtgacagaacagct
aacgccagctctttgctgaatgaggacacaagtttattctacagtgcagaagaaatggat
gctggggaaactccattcagtagtaaaaacaaagagtctggtttagcacacagctcagaa
aagcaattagataaaagcaagaagacaggtaatggtgtccagcatactcaagctgtagaa
acatgtcaatctgagagtaactccctgcatgaaagggaacctgctttggaaagtctgtgg
cagcctaagactcttcacagcaatcctttgagtcaagtttctgggaaaagactgaagaga
agcattcaaaaggtcaacgagtggttttctaaaagcaatgagatgctgtcttctggttcc
tcccaggatgctcctgctggggcaactgacacagaagatggagattcatatttatcagat
agagagtcctgtatttcagagaagactgacctgatgataaactgcacagaagttgtgatg
ggatgtgagaatgataggagtttgtcaaaatcaattgtgcgtaacactgaagataaaata
tttgggaaaacttataaaagagagaggaagtcaaaccccttagtccacacgagagagatg
ccacggagtccaaaaatggaagatgtaactactgatgtgaaaccctcaagtaattccaga
gcaagtaaattaaaacggaaaagaaagactgcctctgatctgcaacctgtggacttcatc
aagaagagagacgaaaaggatctaaagaagcactctgagggtgttaatcagtgccttgtt
ggtagaaatactggaaggaaaaaaagtggtgaaggttccactgttgttaatgggagtccc
atgggtgtgaaaaatggggacagtataccagcagaacttcccctccaagaggggaaatcc
atattgaaaaatgatactgagaaagtaacttgcaacaacactgatggagagccagcacag
aatacctgtgaccgaaagagtagtaaaaaaatgagaagttcacaaacaaaaagaagcaga
cattcaggtaggcctgtgtgttctctgcagctggtagtggatagaaactcaagttgccct
gatcagactgagatgcagattgatagttacccaagcagtgaagagccaagaaaaggtgat
tcagaaaaaaaacgagtcagacgcagccggaggcttcagttactgactgaaaaaatgaca
aaagaaaccaggagaagaggtgagccaaatgagagagcaagaaagcatgccagtgaaagc
aaagattcctcctctgggttacagaggaatgtattggtacatgttcctgaatgcaaagac
cctgatgagcagcaggatgcactgaaccatggcatacctctgtcagacactgatctgaag
ggcaatgactttcaagcagataaaacacaccgtaatcctgaaaattgttctgacggtatg
caaactggagagggcctcttctatgtcaaaatatcaatggaggatttaaatgcttgttct
gttgtgcctgatacagattctcaagtttgtgaaaatcaaggcagccagtcacttctgcag
cctcattccacaaatgtggatcaagctgcctgcccagtgcagaatttgtctgagaataat
cagtgtgctgcgactgagcccaagaagaaagagttgtgtgcgggttcacccaagaccaac
agacattgcacagaaaatgacttggaaaggttcagaaaccgaaagtcacctgaagctaaa
ttcatttcagagttgaacacagaaactgaagacagtgagatagatacacagtatctccga
aatatgttcagacattcaaaaagactatcatttacccttcatcctagtccagtgaaggaa
tcagtgacagaaagcactgcttctgaaactctaaggaaatcaggtgctagctgtgtagaa
tataggcataacaatagagacttaaaaaatgaacctacatatgttaaaaaaacagtgggc
ctggatgaggtttgtgagagagaagagcctaaaacatctgactttgctaaaggtatttct
gggcataggccaggaactcacctttccagggacactgaatatggacacattagtgatgat
ggcaagactatttcacaagttccagatcaagtgcagttattctcaccaccaagagcagcc
acagccaagattaagagtaggggcagactgcaaaaacgaagacaaccaaaggaaaagaga
atttcacctgagacagtgatagaaagtcaattaagtcagaacctaaacaaaagtaatgga
agcctaggtgaccagagtaatatagaagagcaaatttttcaaataactgatttaagcaca
atgaatgaaacagaaagcaatcaaggagtaaaagctgaagaagttgaaaacaaagggcca
gtattaaatttacagcctaagccagtcctggtacatcctgtagtttgtcaacaaagccct
ggtgaatttagctgcaaagtaattgaaaagaacggttatgaaggggaatgcaaacaagta
aagagtgataaagaacaagtattccaaattgccagtgtaggtgtgcttgagtgcttaatt
tcagaggaggctttggaacaacccactgaagatactagtggttttccattgctgtcagag
acccctgatggcttattgtgctctgctggtgacattaaagagaacataagcatttgtgaa
atagataggaaagaaatttctgctgtatttgttaaaaagggtcaggaaccctcattaaga
gaactgaacagtggcagcagtagttctaagtctaggtctcaaaactttgttcgggaaccc
agaagaccggcctggaaattgcagtcctccgaggaggagtctagtgaagatgaagaacta
ccatgctttcaggcattaatatttggcaaatcagcaaacacaccattgcagcctacaaaa
cagatcatgtctacagcagagtcttcatccccggcagagattctagcattgctgaacagt
agcagtggcaatgataaagctgtacagaaaacgcctggagtcagcttgagagatacgtgt
gtttctccaagccaagagtcagaatgctccattaacttgttttcttcccagtccaacatg
tcagaagattcaaccaatagaccacaagagttgaagatgcccataacattagctccttgt
tccaaagaaatgagcagttcgaatgtaagcagagaagctagtccaaatggtaatgaagag
ctgacaggaagaaaaactgatttggaaggtggacaccagctagaccggaatgtgcaacca
aatttaggtgaagcatccggatatgacagtgaagccagtcacccaggagattcttctggg
ctgttctcccagtgtgagatccttaccacacagcagaaggatgccatgcaaaacaactta
aaaaaacttcaacaggaaatggccgtgcttgaggctgtgctggaagagcatggaagccag
ggctttgaatttccacccccagccagtgaactgcctcattccagagtggaagggacactc
acagtgggacagatgagaccagctagaggaacagcattaatttcagaagtaaatcttgaa
aatcaccaaatcagcagttcaaagggactttcagctgatgggttccatgtaatgccaagt
gatcattccaacacaaaaaataaagagctagaaaaagaaggttctaggtcgcctgcttta
cacctttcccatcctaaatcccatctattaaaaaaagaagctctggagcaaggccactgg
tgcccaagcctttggaaagccaaaactcactcccaggagggaacatttcagcaggttgat
gtggcagtgctgttggaacaagaggcagtgaaacaatgtaatcagtatagaattgaacca
gaaaatgcagctgagcaggaatttggaacaaagataaacagtgcagctgttctgtgtggg
aatgaaaggaggactccaaacagctctcccttgaaattttctgaaagacttacccacttt
caaactgaagaatcaactaatagtgtagctgtatcgtggagtgttgttaatgggaagagt
actcagggatgtaagcaggagagaagggcattttcctctgctctgcacgctggagttgta
aaagaaaatgccaaaagccctgtgacctgtagaagacaaatgtcaattgtggcatcaggt
ctgaaccagagtgagcttttactggtgcagaagtttgctaggaaaacccagagcacttta
tctaatcaaattactgaaggaacaacccatgtcataatgaaaacagatatggagctagtg
tgtgagcggacactgaagtactttctgggcattgcaggaagaaaatgggtagttagctat
gaatggattgttcagtcttttaaggaaggaaggatacttgatgagtacaactttgaagtg
agaggagacgtgatcaatgggagaaaccacgaaggccctaagagagctagacaatcccag
gctggaaagctcttcaaagactttgagatctgttgctatggacctttcactgatatgcgc
acaggtgatctagaatggatggtggagctttgtggtgcctcagtggtgaagcagcctcat
ttattcacacagaaagctaactctattgctgtaatagttgcacagcctgatgcttggctc
gaaaacgcagggtgcagagcaatccaacagaagtgtactgctgtggtgacccgagagtgg
gttttagacagcgttgcatgctatgagtgtcaggagtttgatacctaccttgtctcccag
tcatga

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