Chelonoidis abingdonii (Abingdon island giant tortoise): 116824825
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Entry
116824825 CDS
T07367
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03272
Virion - Hepatitis viruses
cabi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116824825 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116824825 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116824825 (LDLR)
Membrane trafficking [BR:
cabi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116824825 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
SGL
EGF_CA
Vgb_lyase
EGF
hEGF
EGF_3
Psg1
Motif
Other DBs
NCBI-GeneID:
116824825
NCBI-ProteinID:
XP_032636281
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MGRAGVAASLLALGFLALRGLAASSAEEKCGKTEFQCQDGECIPSKWVCDGSPECKDESD
EWQETCKSVTCKSEEFSCGGRVNRCIPASWRCDTKADCENGSDERDCAPKSCMDDQFQCH
NGQCVSLAFVCDEDHDCEDGSDEADCPAPTCNPNMFQCNSSLCIPKLWACDDDPDCPDGS
DEWPQNCGGRVAPAPGPCSPLEFHCGSGECIHAQWRCDGGLDCRDRSDEENCAKPTCRPD
EFQCNDGACVHGSRQCDQEYDCKDLSDEVGCKNVTACEGPDKFKCRSGECIPLDKVCNRQ
RDCRDWSDEPIKECDTNECLDNKGGCSHICKDLKLGYECLCPEGYQLVGQKKCEDIDECL
SPDTCSQICVNLEGSYKCECNEGYQLDLTTKTCKAIGTIAYLFFTNRNEVRRMTLDRRDY
GSLISHLKHVVALDLEIAQRKIYWSDLSQKKIYSTRLDQADNATHHTVVISTGLRAPDGI
AVDWVHGNIYWTDSALGTVSVANREGTKRKTLMEEPSSKPRAIVVDPSHGFMYWTDWGSS
AKIAKSGLNGVDSFPLVQDGIEWPNGITLDLVNQRLYWVDSKLHSISSVGVDGGSRKTIL
EDQERLAHPFAVTVFEDKVFWTDILNEAIFSANRLTGTNVTLVAEDLFSPEDIVLYHNLR
QPAGVNWCENHPLPNGGCEYLCLPAPQITHHSPKYTCACPDGLHLAVDMRSCSKDPEVPA
AASTTPLARLLTMTSALKQTARPPTATAGVPSTHAGDGLDLTTSEMVTLSQQARNDVAAE
TNQDKHSGRTALSVVLPLVLISLIAFGAFLVWKNWRLKNINSINFDNPVYQKTTEDEVHI
CRSQDGYTYPSRQIVSLEDDVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggcaggggtcgccgcttcgctgctggctctggggttcctcgccctgcgtggg
ctcgcggcgagctccgcagaggagaaatgtggcaagacagagttccagtgccaggatggc
gagtgcatcccctccaagtgggtgtgcgacggcagcccggaatgcaaggacgagtccgac
gagtggcaggagacctgcaagtcggtgacgtgcaagtcggaggagttcagctgcgggggc
cgcgttaaccggtgcatcccggcctcctggaggtgcgacaccaaggcggactgcgagaac
ggctcagacgagcgggattgtgcaccgaagagctgcatggacgaccagttccagtgccac
aacgggcagtgcgtctccttggccttcgtctgcgacgaggaccacgactgcgaggacggg
agcgatgaggctgactgccccgccccgacctgcaaccccaacatgttccagtgcaacagc
tccctctgcatccccaagctctgggcctgcgatgacgatcctgactgcccggacggctcc
gacgagtggccccagaactgcggtgggcgggtggcccctgcccccgggccctgctcgccg
ctggagttccactgcggctccggggagtgcatccacgcgcagtggcgctgcgacgggggc
ctggactgccgggatcgctcggacgaggagaactgtgcgaagcccacgtgccgcccggac
gagtttcagtgcaacgacggggcctgcgtgcacggcagccggcagtgcgaccaggagtat
gactgcaaagacctgagcgacgaggttggctgcaagaacgtgactgcctgcgaagggcct
gacaagtttaagtgccgctctggggagtgcatccctctggacaaagtgtgcaaccggcag
cgggactgcagggactggtccgacgagcccatcaaggagtgtgatacaaacgagtgcctg
gacaacaaaggcggctgctcccacatatgcaaagatctcaaacttggctacgagtgcctg
tgtcctgagggctaccagctggttggccagaagaaatgtgaagatattgacgagtgtctg
agccccgatacatgtagccagatctgcgtgaacctggagggaagctacaagtgtgaatgt
aatgaaggctaccagcttgacctcactaccaaaacctgcaaagccatcggcaccatcgcg
tacctgttcttcaccaaccgcaatgaagtgaggcgcatgacgctggatcgccgcgactac
ggcagcctcatctcccacctgaaacacgtggtggccctggacctggaaattgcccagcgc
aaaatctactggtctgacctgtctcagaagaaaatctacagcacccggctagaccaggct
gacaacgccacccaccacaccgttgtgatcagcaccggcctccgagcccccgacggcatc
gctgtcgactgggtccacgggaacatctactggacggactcggcgctgggcaccgtctct
gtggccaacagggagggcaccaagagaaagaccctgatggaggagcccagctccaagcca
cgtgccatcgtggtggaccccagccatggctttatgtactggacggactgggggagctct
gccaagattgccaagagcgggctgaatggcgtggacagctttcccctggtgcaagacggc
atcgagtggccgaatggaataactctagatctggtaaaccagcgcctctactgggtggac
tccaagctgcactctatctccagcgtgggcgtcgacgggggcagcaggaaaaccatcctc
gaggaccaggagagactggctcaccctttcgcggtcaccgtctttgaggataaagtgttc
tggacggatatcctcaatgaagccatcttcagcgccaaccgcctgacgggcaccaatgtc
accctggtggcagaagacttgttttccccggaagatattgtcctgtatcacaacctgcgg
cagcctgcaggcgtcaactggtgcgagaaccaccctctcccgaatggcggctgcgagtac
ctgtgcctccctgccccccagatcacacaccactcgcccaagtacacctgtgcctgcccc
gatggcctgcacctcgctgtggacatgaggagctgctccaaagatccggaagtccccgct
gccgccagcaccacgcctctggcccggctgctcaccatgaccagtgccctgaagcagaca
gcaaggccaccgactgccacggctggggtgccgagcacccatgctggggatggcctcgac
ctcaccacgtcagagatggtcactttatcccagcaggctcgaaatgatgttgctgctgag
accaaccaggacaagcacagcggccgcactgcgctctccgttgtcttgccgctggtgctc
attagcttaatcgcctttggtgctttcctggtgtggaagaactggcgcctcaagaacatc
aacagcatcaactttgacaaccccgtctatcagaaaacgacagaggacgaggttcacatc
tgtcggagccaggacggatacacgtacccgtcgagacagatcgtcagcttggaagacgac
gtagcgtga
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