Chelonoidis abingdonii (Abingdon island giant tortoise): 116825354
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Entry
116825354 CDS
T07367
Symbol
NECTIN4
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cabi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116825354 (NECTIN4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116825354 (NECTIN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cabi04515
]
116825354 (NECTIN4)
Cell adhesion molecules [BR:
cabi04515
]
Immunoglobulin superfamily
Nectin family
116825354 (NECTIN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
ig
I-set
Ig_2
Stevor
Ribosomal_60s
Adeno_E3_CR2
EphA2_TM
U1snRNP70_N
PAXIP1_C
Cytomega_UL84
DUF4446
Motif
Other DBs
NCBI-GeneID:
116825354
NCBI-ProteinID:
XP_032637172
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGSFAPAPAPAAWKLLLLCLAASGSLAGVLEMERSVTAVLGKDVVLPCRYRAQEGEKVV
QVTWLKLGTDGQNVEIAVLNSEYGEHVQEPYVGRVLRQVPGPLEDGAIVLKNAVQADEGA
YECRLITFPSGNFQGSMTLSVLVPPLPTLNPGPPLEEGQGRTLAASCTAEGNPVPTVTWE
TQVHGTNSTRQSLHPRSASVTSEFFLVPGRSMNGKTLTCVVSHPGLPHEKRITHVLSVAY
LSDASVRGHEEEEDWQAGKEGVSLKCLGEGNPPPTYNWTRLNGPMPEGVKVKGATLLFQR
PLIPDDTGIYICQVANRFAAKEVRASISIKAESELQKVNVVSASVVVVGVIAAVLLCLLV
LVVVLMTLYHRRKTRRISEKYEEELTLTRENSIRRLYSSHSASTRNQTEETLHLRGDSRQ
GSLRGDSLRGTSICSVMSEEAEGRSYSTLSTVREIETQTEQPPAPAPTPEEEKEEKEKER
EEEEEEEREENTIKAAMTHFVQENGTLRAKPTTNGIYINGRGHLV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtccttcgccccggccccggcccccgcggcttggaaactcctgctgctctgc
ctcgcagcctccgggtccctggcgggggtgctggagatggagcgcagtgtcactgcggtg
ctgggcaaggacgtggtgctgccgtgccgttatcgggcgcaggagggcgagaaggtggtg
caggtgacgtggctgaagctgggcaccgacgggcagaacgtggagatcgcagtgctgaac
tcggagtatggggagcacgtccaggagccctacgtggggcgggtgctgcgacaggtgccg
gggccgctggaggatggcgccatcgtgctgaagaacgccgtgcaggctgacgagggcgcc
tacgaatgccgcctcatcaccttcccctcgggcaacttccagggcagcatgacgctcagc
gtgctggtgcccccactgccaaccctgaaccctggccccccgctggaggaagggcagggg
aggacgctggccgcctcctgcacggccgagggcaaccccgtgcccaccgtgacctgggag
acgcaggttcacggcaccaacagcacccgccagtccttgcacccccgctcggcctccgtc
accagcgagttcttcctggtgcccgggcgcagcatgaacggcaagacgctcacctgtgtc
gtcagccacccggggctgccgcacgaaaagaggatcacccacgtgctgagtgtcgcctat
ctctcagatgcctcagtgcgagggcacgaggaggaggaggactggcaggcaggcaaggag
ggggtctcgctgaagtgccttggtgagggcaaccccccacccacctacaactggacccgg
ctcaatggccccatgcccgaaggagtgaaggtcaagggggccaccctcctcttccagaga
cccctcatccccgacgacacaggcatctacatctgccaggtcgccaacaggtttgcggcc
aaggaagttcgggccagcatcagcataaaagcagagagcgagctgcagaaggtgaacgtg
gtctcggcctcggtggtggtggtgggcgtcatcgcggccgtgctactctgcctgctggtc
ctggtcgtcgtgctcatgaccctctaccaccgacggaaaaccaggcgcatctccgagaaa
tacgaggaggagctgaccctaacaagggagaattccatcaggcgcctgtactccagccac
agtgccagcacccggaaccagacagaggaaaccctgcacctgcggggggacagccggcag
ggaagcctgcggggggacagcctgcgcggcaccagcatctgctccgtcatgagcgaggag
gcagaggggcgcagctactccaccctgtcgacggtgcgggagattgagacgcagacggag
cagcccccggccccagcgcccaccccggaggaggagaaggaggagaaggagaaagagagg
gaggaggaagaggaggaggagcgggaggagaacaccatcaaggcagccatgacccacttc
gtgcaggagaacggcactctgcgggccaagcccaccaccaacggcatctacatcaatggg
cgaggccacctggtgtga
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