Chelonoidis abingdonii (Abingdon island giant tortoise): 116827465
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Entry
116827465 CDS
T07367
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC116827465
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116827465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116827465
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cabi04054
]
116827465
Membrane trafficking [BR:
cabi04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116827465
Pattern recognition receptors [BR:
cabi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116827465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
PYRIN
Motif
Other DBs
NCBI-GeneID:
116827465
NCBI-ProteinID:
XP_032640917
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MEKTGRQHLLEALKELGARELKELRAKISQVWLKRGLEGWGLLSGAKPFHPSLWLTVDAG
LKVTVEGLRAVNQGDLAEELAALLDTYEEQRREQRSAASRARGRLICTLNELGEDELGRF
KVKLADMGQKGGYNPIPWGRLGRAKPAEVAAELINHYGVRCGLETAGEVLRAIRRGELAG
GLAEALETYEERCREQRLALCRVREMQARTVGSLGEEDLRRIWESATETHPQGGPTVNPW
EGQERAEVMEVIEDLVSTYGEGHAVWMTQEMLRAVSQGPLAERLAEATGIAGDGPSREDL
TTDPSGKQEKCTWCVTEEDLPEVTPELVLESEGKPRSYRVHLPGPGSFRCSETELGFEVR
AAVTVQYGYGSWDQHLSAAEKLQWMVAGPLFNIWVEPAGAVAAVHLPHFLCLAGTANKSS
KDAVLPQMRIAHFVDGRMTLEEPTQVRPFHAVLENPSFSFIGVLWKPIYAMFPFIPIHSV
VLIYRVVKAAAITLHLYLIPNDRSLIQAVEEEEKKHQSIQVLKPPQTKPLYFGSCYTVSS
SLDLEVNPEEVDFRYMSPEDRQPFMEIYTKDMKEGLKLIVLMKRYGEVVWKVLVRPEDVM
LSGSSSEKFKGLRKLLPELKQGFTGLCSQREHRMSPSAAWNSPVWPVDKEAEGEPSSSAT
LRTVTNKHGDWPAKVSSGGSWEVIQRLRSELTTILQSDAEAVVSAADAHLLLTQGEYLAL
NRLEDPEIRVATLIDTVLAKGDQAHQLFLDCLRNLFFTFPALEPIITGLQTGFQSDVAIP
RPGPQTGSPVSAEGEHFVDRHRAELIQRVCVVDGVLDMLCGTVLDNEQYQSIRAERSNME
KMRXLYELMPSWNRVCKDRLYQVLKAKHKFLIEELEGK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacaggcaggcagcacctgctggaagccctgaaggagttgggggcccgggag
ctgaaggagttaagggccaagatcagtcaggtctggctgaagagggggctggagggctgg
gggctgctgagcggagcaaagcccttccacccctctctatggctgacggtggatgctggg
ctgaaggtgacagtggaggggctgagagctgtgaaccagggtgatctggcagaggaattg
gctgcactgctggacacttacgaggagcagcgccgggagcaacgatcagccgcctccaga
gccagaggtcgcctgatctgcaccttgaatgagctgggggaggacgagcttgggaggttc
aaggtcaagctggccgacatggggcagaaagggggttacaaccccatcccctggggccgg
ctggggagagcgaagcctgcagaggtcgccgcggagctgatcaaccactatggggtgcgc
tgtggcttggagacggctggggaagtgctcagggccatcagacggggggagctggcaggg
ggactggccgaggctctggagacttatgaggagcgatgcagggagcagagactggccctc
tgcagagtgagagagatgcaggcacgaacggtgggcagcttgggcgaggaggatctcagg
aggatctgggagagtgcgaccgagacccatccacagggaggccctacggttaacccctgg
gaagggcaggagagagcagaggtcatggaggtgattgaggatctggtcagcacctacgga
gaaggccatgctgtgtggatgacccaggaaatgctgagagccgtgagccagggacccctg
gctgagcgactggctgaggccactgggatcgcaggagatggacccagcagggaggacctc
accacggacccctcggggaagcaggagaaatgcacatggtgtgtgacagaggaggacctg
ccagaagtgacgccagagcttgtgctagagtctgaggggaagcccagatcctacagggtt
cacctcccagggccaggctccttccgctgctctgaaaccgaactggggtttgaggtgagg
gcagccgtgaccgtccagtacggatacggctcctgggatcagcatctgagcgcagctgag
aagctgcaatggatggtggccggccctttgttcaacatctgggtggaaccggccggggct
gtggcagccgttcacctcccgcatttcctgtgcctcgcaggtacagcgaacaagagcagt
aaagatgctgttctgccccagatgcgaatcgctcacttcgttgacgggaggatgactctg
gaggagccaacacaggtgaggccgttccatgccgtgctggagaaccccagtttctccttc
atcggggtgctctggaaacccatctatgccatgtttccgttcatacccatccactcagtg
gtgctgatctaccgggtagtcaaggctgcagccatcaccctccacctctacctgatcccc
aacgaccgctcgctcatacaggcagtggaagaagaggagaaaaagcaccagtccatacag
gtgctcaagccccctcagacgaagcccctctactttggctcttgttacactgtgtccagt
tcgctggacttggaggtaaaccccgaggaagtggactttcgctacatgagtccagaggac
cggcagccattcatggaaatctacaccaaggacatgaaggagggactcaaactcattgta
ctgatgaaacgctatggggaagttgtctggaaggtcttggtaagaccagaggacgtgatg
ctttcgggttcatcctctgaaaagttcaaggggcttcggaaactgctccctgaactgaaa
caagggtttactggactatgcagccagagagagcacagaatgtcaccctcagctgcctgg
aactcaccggtatggcctgtggacaaggaagcagagggagagccaagcagcagtgctaca
ctcaggacagtgactaacaagcacggtgactggccagcaaaggtgtcaagcgggggctcc
tgggaagtgatccagcggctgagaagcgagttaacaacaatcctccagagcgatgcagag
gccgtggtcagcgctgccgatgcccacctcctcctcacacagggagagtacctcgccctg
aaccggctggaggatccggagatcagggtcgccacattaattgatacggtgctggccaag
ggggaccaggcccatcagctcttcctggactgtctgagaaacctgttcttcacctttcct
gccctggagcctatcatcacggggttacaaacaggcttccaatcagatgtggctatcccc
aggcctggaccacagacaggaagcccagtcagtgctgaaggggaacattttgtggaccgg
caccgagcagagctgattcaacgggtctgtgtggtggatggggtcctggacatgctgtgt
ggcactgtgctggataatgagcagtaccagagcatccgagccgagagaagcaacatggag
aagatgcggtagctgtacgagctcatgccgagctggaaccgggtctgcaaggaccggctc
taccaggtgctgaaggccaagcacaagttcctcattgaagagcttgaagggaaatga
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