Chelonoidis abingdonii (Abingdon island giant tortoise): 116829637
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Entry
116829637 CDS
T07367
Symbol
APAF1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04115
p53 signaling pathway
cabi04210
Apoptosis
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116829637 (APAF1)
04115 p53 signaling pathway
116829637 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116829637 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WHD_APAF1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NB-ARC
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
CARD
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
Beta-prop_HPS5
CARD_2
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_IFT140_2nd
Beta-prop_DCAF12
AAA_16
Beta-prop_WDR11_2nd
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_Nup120_160
nSTAND6
AAA_22
Beta-prop_RSE1_2nd
LRRC37
Motif
Other DBs
NCBI-GeneID:
116829637
NCBI-ProteinID:
XP_032644452
Ensembl:
ENSCABG00000004476
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MDVKSRNHLLLNHEALVRDIKTSYIMDHMIADEVLTLQEEEKVKAQTTQKERAAMLIKII
LAKDNYSYISFYNALLHEGYKDLAALLQDGIPIISSCNGNKSMDGVTSYVRTVLCEGGVP
QRPVVFVTRPKLVKAIQQKLYNLRSEPGWVTVYGMAGCGKSVLTAEALRDHHLLEDCFPG
GIHWISIGKQDKAGLLMKLQNLCSRLDQDFSLSQRPPLNIEEAKDRLRLLMLRKYPRCLM
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDSVTGNKYEVPVESGLAHDKGLEILSLFVN
MKITDLPEEADSIVGECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSMSVEMLNENFKDYYKDLSVLQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKKIVNQYKKHYKLHIPTPAQEDC
MYWYNFLAYHMASANMQNELCALMFSLDWIKAKTELVGPAHLIHEYVEYSHILDQKDSRV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPEISEVYQQAKLQAQQELVKGAFYLEWVNK
KSMKNLSRLVVRPHTDAVYHACFSKDGQRIASCGADKTLQVFKAKSGEKLLEIKAHDDEV
LCCAFSADDRFVATCSVDKKVKIWNSRTGQLVQVXEEHGEQVNCCQFNNTNDQLLLATCS
NDTYIKLWDLNKKYCRNTMFGHLNSVSHCRFSPDDKYVASCSSDGTLKLWEVCSANELKT
IDIKDFFRNADEYQDDVEVLVKCCSWSANCATIMVAAKNRLLLFDVITSDLLAEVLISHH
STIQYCDFCPGNQLVAVALSHYSVELWNTESFLKVADCRGHLSWVHCVTFSPDGSLFLTS
SDDQTIRIWESSKVCKSSALVLKRELDVVFQDDGLMILAILNQQHLQLIDGNTGHTDYLT
EAQESLICCCCLSEDLQYAAFGEENGTVKVLKLSNRVFKSRTGHEKSVQHCQFTSDGRTL
ISSSDDSTIQVWNWQSEEYIFLKGHKEAVKNFRLLENSRLLSWSFDGTVKVWNICTGIIE
EDFVCHEDAVLSCAVSPDATKFSSTSADKTAKIWSFESSSVLHELHGHKGCVRCCTFSFD
NKFLATGDDNGEIRIWDVSRGELLHLCSPITVDEGESTHGGWVTDLCFSPESNMLVSCGG
YLKWWNVTTGESLQTFYTNGTNLKSIYVSPSFKVYVTIDNLGILYVLRMLE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaatctcgaaatcatttgcttctgaatcatgaagcattggtaagagacatc
aagacctcttacattatggatcatatgattgctgatgaagtactaacattacaggaggag
gagaaagtaaaagcacagactacacagaaagaacgagctgctatgctaataaaaattatt
cttgcaaaagataattactcatacatatccttctataacgcactgcttcatgaagggtac
aaagacctggccgctcttcttcaggatgggatccctattatatcctcttgtaatggaaat
aagtctatggatggagttacttcgtatgtgaggactgtcctctgtgaaggtggagtacca
caaagaccagttgtatttgttactcgtccaaagctggtaaaagcaattcaacagaaactg
tacaacttaagaagtgaaccaggttgggttactgtttatggaatggcaggttgtgggaag
tctgttttaacagcagaagcactacgggatcaccatctcttggaagattgcttcccagga
ggaatacattggatttctattggaaaacaagacaaggcggggctcctaatgaaactccaa
aatctttgtagtagactagaccaggacttctctctttcacaaaggccaccacttaatatt
gaggaggctaaagaccgccttcgtctgctgatgctgcgcaaataccccaggtgtctcatg
gttctggatgacatttgggattcctgggtattaaaagcttttgataatcagtgtcaagtt
cttattactagtagggataggagtgtgacagactcagtgactggcaataaatatgaagtt
cctgtggagagtggattagcacatgacaaaggacttgaaattttatctctgtttgttaat
atgaaaataacagatctgccagaagaggctgatagtattgtaggggaatgcaaaggttcg
cctcttgtagtatcattgataggtgcattattacgagatttccctaatcgttggggatat
tacctcagacagctgcagaataagcaatttaaaagaataaggaaatcatcttcttatgat
tatgaagcacttgatgaagccatgtctatgagtgttgaaatgttaaatgaaaattttaaa
gactattataaagatctttctgtccttcaaaaggatgttaaggtgccgactaaggtgctt
tgtattctttgggatatggagactgaagaagtggaagatatactgcaggaatttgttaat
aaatctctcttattttgtgatcgtaatgggaaatcattccattattatttgcatgatctt
caacttgactttctcacagagaagaatcgcaatcagcttcaggagctgcataaaaagata
gtaaatcagtacaagaaacattataaactacatatacctactccagctcaagaggactgt
atgtactggtataactttctagcataccacatggctagtgccaacatgcagaatgaactt
tgtgctctcatgttttctctagattggataaaagcaaaaacagagttggtagggcctgcc
catttgattcatgaatatgtagaatatagccatatattggatcagaaggatagcagagta
cgtgaaaactttcaggaatttctgtctttaaatggacaccttcttggaagacaaccattt
cctgacatcatacagttagggctgtgtcaaccagagatttcagaagtgtatcaacaagcc
aaactgcaagctcagcaagaacttgttaaaggagcattttacttagaatgggtaaataaa
aaatccatgaagaacctctcccgtttggttgtccgtccccatacagatgcagtttaccat
gcctgcttttccaaggatggacagagaatagcttcttgtggtgctgataaaaccttgcag
gtgttcaaagcgaaaagtggagagaagcttttggaaataaaggctcatgatgatgaagta
ctttgttgcgctttctctgcagatgacagatttgtagcaacttgttcagtggataaaaaa
gttaagatctggaactcaagaacaggtcagcttgtacaggtataagaagaacatggagaa
caggtcaactgctgccagtttaataacacaaatgatcaacttctcttagccacctgctca
aatgatacttacatcaaactctgggatttgaacaaaaagtattgtcgaaatacgatgttt
ggtcacttaaattctgtcagccactgcagattttcaccagatgacaaatatgtggctagt
tgctcatcagatggaacattaaagctttgggaagtgtgttcagcaaatgaactgaaaact
attgatataaaagacttcttcagaaatgcagatgaataccaggatgatgtggaagtgtta
gtgaagtgttgctcctggtcagcaaattgtgctacaataatggtggcagccaaaaatcgg
cttttactttttgatgttataaccagtgacttgttagcagaagtccttataagtcaccac
agtacaatccagtactgtgacttttgtcctggcaatcagttggtagcagttgctttatca
cattattctgttgagttatggaatacagaatcttttttaaaagtagctgattgcagagga
catctgagttgggttcactgtgtgacattttctcctgatggatctttatttctgacatcg
tcggatgaccagacaattaggatctgggagtcaagtaaggtgtgcaagtcctctgctctt
gtgttaaaacgtgaactagatgtcgtgttccaggatgatggactgatgattttagcaatt
ctcaatcagcaacatctacaactaattgatggaaatacaggccatactgactatctgact
gaagcccaggaatctcttatttgctgctgttgcctaagtgaagatcttcaatatgcagca
tttggagaggagaatggaacagtaaaggttttgaaattgtcaaatagagttttcaaatct
aggactggacatgagaaatctgtacaacattgccagtttacatctgatggacgaaccctt
atttcaagctctgatgattcaactatacaggtgtggaattggcaatcagaagaatatata
tttttaaaaggtcacaaggaagcagtgaagaattttaggcttttggaaaattcaagactt
ctttcctggtcatttgatggaacagttaaggtgtggaatatttgtactggaattatagaa
gaagattttgtttgccatgaagatgctgttctttcttgtgctgtttcacctgatgccacc
aagttttcatctacctctgctgacaaaactgccaagatatggagctttgaaagttcatct
gttcttcatgagcttcatggtcacaaaggctgtgtgcggtgctgcactttctcctttgat
aacaaattcttggccactggagatgacaatggagaaataaggatttgggatgtctcaaga
ggtgaattacttcatctctgctcccccattactgtagatgaaggagaatcaacacatggt
ggctgggtaacagacctctgtttttctcctgagagtaatatgcttgtgtcatgtggagga
tatcttaagtggtggaatgtaactactggtgaatccttacaaacattctacacaaatgga
acaaacctcaagtcaatatacgtgtcccctagtttcaaagtatatgtgaccattgataat
cttggtattctttatgtgctacggatgctggaataa
DBGET
integrated database retrieval system
