Chelonoidis abingdonii (Abingdon island giant tortoise): 116831710
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Entry
116831710 CDS
T07367
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cabi04812
]
116831710 (PKP1)
Cytoskeleton proteins [BR:
cabi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116831710 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
HEAT_2
ARMC9_ARM
V-ATPase_H_C
Atx10homo_assoc
TraG_N
Mo25
Motif
Other DBs
NCBI-GeneID:
116831710
NCBI-ProteinID:
XP_032647790
Ensembl:
ENSCABG00000016495
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTRGTGKQRVQEQVMMTVKRQKQKSSQSS
SLGRSNRGSIYDGLADGVNYGTARGSYYAKAQTGNSNWGYPMYNGTLKRETDNRRFSSYS
QMEGWGSRHHSKAVGSPTSPGGNYCLKSSRSEPDLCYEPPRGTLRRNQVGNQAVHKATLN
RQSMYSSCSTHHGTTRKPLLDRNLSCTLGNKPDALYAQPVTSSRQDGVYGHSMSSSRICN
DELDSVAMTIQKAIQLLCASDEKSQAMGAYYLQHTCFQDESAKQEVYRLGGIGKLIELLR
SPNQNVQQAAAGALRNLVFRNPANKLETRRQNGIRECVSLLRRTSNTEIQKQLTGLLWNL
SSTDELKEDLIHEALPVLTDCVIIPFSGWSDGVSNRTREIVDPEVFFNATGCLRNLSSAD
AGRHTMRNYPGLIDSVMTYTQNCVAANRPDDKSVENCICILHNLSYRLDAEVPNKYTQLN
HVARNAYVDKTLTGCFNNRSGKLENDEYVLPIPDEEYKPRGPSWLYHSDAIRTYLNLMDQ
SKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSSNSEVVRSGASL
LSNMSRHPILHKTMAPQVLPDVSRLLAFQSGNNSNFGDIMSSACYTMRNLIMSNPQMAKP
YLTSSLLNNVVNLCRNGSCPKAAEAARLLLGDLWSHRELQSILKQQGFDKNMLGSLTGST
LRTLSSRF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctcctctgaaaacagccctggcttatgagtgtttccaagaccaggccagc
tctacattggccttgccctcggatcacaagctgaaaactagaggcacgggaaaacagagg
gtccaggagcaggtgatgatgacagtgaaacggcagaagcaaaagtcctctcagtcatcg
agccttgggcgctccaaccgaggttccatttatgatggtttggctgatggcgtcaactat
gggactgcccggggcagctattatgccaaagcccagacaggaaacagcaactgggggtat
ccgatgtacaatgggacccttaaaagagagaccgacaaccgacgcttcagctcttacagt
cagatggagggctggggcagccggcaccacagcaaagccgtcggcagccccaccagcccc
ggcggcaactactgcctcaagagcagccggagtgagcctgacctgtgctacgagcctccc
cggggcacgctcaggagaaatcaagtgggaaaccaggcagtgcacaaggcaaccctgaac
cgccaaagcatgtacagcagctgcagcacccaccatgggaccactaggaaacccctcctg
gatcgcaacctctcctgcactttgggcaacaagccggacgcattgtacgcccagcctgtg
acgagcagcaggcaggacggggtgtatgggcattctatgtccagctccagaatatgcaat
gatgagttggacagcgtggcaatgaccatccagaaagccatacagctcctgtgcgcctcg
gatgagaaatctcaagccatgggtgcgtactatctccagcacacctgcttccaagatgaa
tctgccaagcaagaggtctaccggctgggtggaattggcaagctaatagaactcctccgc
agcccaaaccaaaatgtccagcaggctgcagctggggctcttagaaacctggtcttcaga
aatcctgccaacaagttagaaacccgacggcagaatgggataagggagtgtgtgagcctc
ctgaggagaacttcgaacactgaaatacagaaacagctgacagggctgctgtggaacctg
tcctccactgatgagctgaaagaagatttgatacacgaagctctccctgtcttgacagat
tgtgttatcatccctttctcggggtggtctgatggggtcagtaataggacaagagaaatt
gttgaccccgaggtgttcttcaatgccacaggctgtttgagaaacctgagttctgcagat
gctggacgtcacaccatgagaaactaccctggcctgattgactcagtcatgacttatacc
cagaattgtgtggctgccaaccggcctgatgacaagtccgtggagaattgcatctgtatc
ctgcacaatctgtcctaccgcctggatgccgaggtgcccaataaatacacccagctcaac
catgtggccaggaatgcctatgtggacaagaccctcacaggctgcttcaacaacaggagt
gggaagctggagaatgatgagtatgttctacccattcccgatgaggagtacaaacccaga
gggcccagctggctctaccattctgatgccatccgcacatacctgaacctgatggaccag
agcaagaaagatgccaccctcgaggcctgtgctggggccctgcagaacctcactgcaagc
agaggactgatgtccaatgcaatgagccagctgattggcttaaaggagaagggtttgcct
cgtatagcacggctcctccaatccagtaacagtgaagttgtccgatctggggcttccttg
ttgagcaacatgtcccggcatcctattctccacaaaaccatggctccccaggtgcttcca
gatgtgtcccgtctcctggccttccagtccgggaacaacagcaactttggagatattatg
tcatctgcttgctacaccatgcggaacctaatcatgtccaacccgcagatggccaagcct
tacttgacaagcagcttgctaaataacgtagtaaatctgtgccgaaatggctcctgtcca
aaagcagctgaagcagctcgtctcctgctgggtgatctgtggtcacacagagagctccag
agcattctcaaacagcaaggattcgataagaacatgttgggatccttaaccgggagcact
ttaaggaccctgtcttccagattctaa
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integrated database retrieval system
