KEGG   Chelonoidis abingdonii (Abingdon island giant tortoise): 116835058
Entry
116835058         CDS       T07367                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
cabi  Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04145  Phagosome
cabi04514  Cell adhesion molecules
cabi04672  Intestinal immune network for IgA production
cabi05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cabi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116835058
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116835058
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    116835058
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116835058
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cabi04147]
    116835058
Exosome [BR:cabi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116835058
  Exosomal proteins of epithelial cells
   116835058
  Exosomal proteins of breast milk
   116835058
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 ig Ig_2 SMK1_alpha_su
Other DBs
NCBI-GeneID: 116835058
NCBI-ProteinID: XP_032653408
Ensembl: ENSCABG00000015626
LinkDB
Position
Unknown
AA seq 258 aa
MGAGRGVPMAQLALLTLLALPGAGAVTVDHVSSQVEFYQRTDRSQQESGEFMFEFDGDES
LHVDLEKKETVWRLPEFSKFASFEAQGALVNIAVDKQNLEIMIKRSNRTRAENVPPEVTM
FPEDPVELGEPNVLICFVDKFFPPVLSVTWLKNGQEVTGGVSETDFYPRQDNSFRKFSYL
PFLPSQGDFYDCRVEHWGLPEPFTKHWEVQVPTPVPETTETLVCALGLAVGIVGIIAGTI
LIIKGMKMNAARNPRGPL
NT seq 777 nt   +upstreamnt  +downstreamnt
atgggtgcaggacggggcgtccccatggcccagctggccctgctcaccctgctggccctg
ccgggtgccggggcagtgacagtggatcacgtgtcctcccaggtggagttctaccagcgc
acggaccgatcccagcaggagtctggggagttcatgttcgagtttgatggggacgagagc
ttgcatgtggacctggagaagaaggagaccgtctggcgcctgcctgaattcagcaagttc
gccagctttgaggcgcaaggcgccctggtcaacatcgctgtggacaagcagaacctggag
atcatgatcaagaggtccaatcgcacacgggctgagaatgtgccccctgaggtgaccatg
ttccccgaagaccccgtggagctgggcgagcccaacgtcctgatctgctttgtggacaag
ttcttcccgccggtgctcagcgtgacgtggctgaagaacgggcaggaggtgacggggggc
gtctccgagaccgacttctacccccgccaggacaactccttccgcaagttctcctacctg
cccttcctccccagccagggcgacttctacgactgccgggtggagcactgggggctgccc
gagcccttcacgaagcactgggaagtccaggtgcccacccccgtccccgagaccacagag
accctggtgtgcgccctgggcctggccgtgggcatagtcggcatcatcgcaggcaccatc
ctcatcatcaagggcatgaagatgaatgccgcccgcaacccgcggggccccttataa

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