Chelonoidis abingdonii (Abingdon island giant tortoise): 116837806
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Entry
116837806 CDS
T07367
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04115
p53 signaling pathway
cabi04145
Phagosome
cabi04148
Efferocytosis
cabi04350
TGF-beta signaling pathway
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
cabi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116837806 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116837806 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116837806 (THBS1)
04148 Efferocytosis
116837806 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
116837806 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116837806 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116837806 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116837806 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cabi00536
]
116837806 (THBS1)
Membrane trafficking [BR:
cabi04131
]
Endocytosis
Phagocytosis
Opsonins
116837806 (THBS1)
Glycosaminoglycan binding proteins [BR:
cabi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116837806 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
Laminin_G_2
EGF
Motif
Other DBs
NCBI-GeneID:
116837806
NCBI-ProteinID:
XP_032658412
Ensembl:
ENSCABG00000006853
UniProt:
A0A8C0GH40
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MELAGGLFLLLMLGVSGTNQIPESGGDDNSVFDLFELIGFTRKGAGRRATGVHLVKGPEP
SSPAYRIEDASRIPAVPDDKFQDLLDAIYAEKGFILLATLRQTKKSRGTLLGVERRDSSG
HIFNLVSNGKAGTLDLSLSGDGKQQVVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM
ENAELDIPIQNIFTRDLASSAKLRIAKGGVNDNFQGVLQNVRFVFGTTLEAILRNKGCSS
STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVEMQGLRSMVTTLQ
DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP
LMPCSNATVPDGECCPRCWPSDYAEDGWSPWSEWTSCSVTCGNGVQQRGRSCDSLNNRCE
GSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQMNGKPC
EGEARETKSCQKDPCPINGNWGPWSPWDVCTVTCGGGIQKRGRLCNDPEPQYGGKDCVGH
ATGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPTGYHGNGVQCKDIDECQE
VPDTCFVLNGVHRCENTEPGYNCLPCPPRFTGTQPFGRGIEDATANKQVCKPRNPCTDGT
HDCNKNAKCSYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDKIPDDRDNCAFIYNPQQYDYDRDDVGDRC
DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDLDGVGDQCD
NCPMEHNPDQEDSDSDRIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDDKDNCRLVANPDQTDSDGDGRGDACKDDFDQDNVPDIDDICPENVDISE
TDFRQFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTSGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagctagccggcggactttttctcctcttaatgcttggtgtctctggaacaaaccag
atcccagagtctgggggagatgataacagtgtgtttgatctcttcgaactcatcggcttc
actcgcaagggggctggacgtcgggcaactggggtgcacttggtgaagggacctgagccc
tccagccctgcttaccgcattgaggatgccagccgcatcccagccgtgcctgatgacaag
ttccaagatttgctggatgctatctatgctgagaagggtttcatcttgctggctaccctc
cggcagaccaagaagagccggggcaccctgctgggtgtggagcgcagggacagctctggc
catatcttcaacctggtgtctaatggcaaggcaggcaccctagacttgagcctgtctggt
gatggcaagcagcaggtggtgtcagtggaagatgccctgctggccactgggcactggaag
aatatcaccctgttcgtgcaggaggaccgagcccagctgtacgtaggatgtgagaagatg
gagaatgctgaactggacatccccatccaaaacatcttcaccagggacctggccagcagt
gccaagctccgcatcgccaagggtggtgtcaatgacaatttccagggagtgctgcagaat
gtgcggtttgtctttggaacaaccctggaagccatcctaaggaacaaaggttgctccagc
tccactagtgcgattattacgttggacaatcccatcaatggctccagtccagctatccgt
actaattacattggccataaaacaaaggatatccaggcagtctgtggcttctcctgtgat
gaacttacaaatatgtttgtggaaatgcaaggattgcggtccatggttacaacacttcaa
gacagagtgcgcaaagtgactgaagaaaatgaattgatcgccaaagtagtccaaatcact
cctggtgtgtgcattcataatggaattctgcacaaaaataaagaagagtggactattgat
agttgcactgaatgtacttgccagaattctgccactatatgcaggaaagtgtcttgccct
ctcatgccttgttctaatgccacagttcctgatggggagtgctgcccacgatgctggccc
agtgactatgcagaggatggctggtccccttggtctgagtggacttcatgctctgtgacc
tgtgggaatggggttcagcagagaggccgttcttgtgatagtctcaataatcgctgtgaa
ggttcctctgtgcagactcgtacctgccacattcaggagtgcgataagaggttcaaacag
gatggtggttggagccattggtcaccatggtcatcatgttctgttacctgtggcactggc
atgatcactagaatccgtctttgcaactctccagtcccacagatgaatggcaaaccgtgt
gagggtgaggcaagggaaaccaaatcatgccagaaagacccttgtccaataaatggaaac
tggggaccctggtctccatgggatgtatgtacagtcacatgtggaggaggcattcaaaaa
cgtggacgtctttgcaatgatcctgagcctcagtatggtgggaaggactgcgtaggtcat
gccacagggacccaggtctgcaacaagcaggactgtccaatcgatggatgcctgtctaat
ccctgctttgcgggaacgacatgtaccagctcccctgatggttcctggaagtgtggtgcc
tgccctactggttaccatggcaatggtgttcaatgcaaagatattgatgagtgtcaagag
gttcctgatacctgctttgtcctcaatggagtgcacaggtgtgagaacactgaacctgga
tacaactgcttgccgtgcccaccacgtttcactggaacacagccttttggtcgtggtatt
gaggatgccacagctaacaagcaggtctgcaaaccacgtaatccatgcacagatggaact
catgattgcaacaagaatgccaagtgcagttaccttggccacttcagtgaccccatgtac
cgctgtgagtgtaaaccaggctatgctggcaatggcataatctgtggtgaagatactgat
ttagatggatggccaaatgaggacctggtctgtgttgccaatgctacttatcactgcaaa
aaagataactgtcccaatcttcccaactctgggcaggaagactatgataaggatggaatt
ggtgatgcctgtgataacgatgatgatgacgataagattccagatgacagggacaactgt
gcattcatttacaacccgcaacagtatgactatgatagggatgatgttggtgatcgctgt
gataactgtccctacaatcacaaccctgatcaaactgacactgataacaatggagaagga
gatgcatgtgctgtggatattgatggagatggcattcttaatgaaagggataactgccaa
tatgtctacaacgtagaccagagggatacagacttggatggtgttggagatcagtgtgac
aactgccctatggaacacaatccagaccaggaggattctgactctgaccgcataggtgat
gaatgtgacaacaatcaggacatagatgaagatggccatcaaaataacctagataactgc
ccctatgtgcccaatgccaatcaagctgaccatgacaaagatggcaaaggtgatgcctgt
gaccatgatgatgacaatgatggtatccccgatgacaaagataactgcagactggttgcc
aacccagaccagactgactctgatggtgatggacgtggagatgcttgcaaagatgacttt
gaccaagacaatgtgccagacattgatgacatctgccctgagaatgttgacatcagtgag
acagacttccgtcaatttcagatggttcccctggatcccaagggaacatcacaaaatgat
cctaactgggtggttcgtcaccagggtaaagagctggttcagactgtcaattgtgatcct
ggacttgcagtgggatttgatgaatttaatgctgtggacttcagtggcacattcttcatc
aatacagaaagggatgatgactatgccggctttgtatttggttatcagtctagcagccgt
ttctatgtagtcatgtggaaacagatcacccagtcctattgggactcaacaccaaccaaa
gctcaaggatactcaggtctttctatcaaagtcgtgaactctaccacaggtcctggagag
caccttcgaaatgctctgtggcacacaggaaacacctctgggcaggtgcggaccttgtgg
catgaccctcgtcacataggctggaaagattttactgcctacagatggcgtcttagccac
agaccaaagactggctacattagagttgtaatgtacgaagggaagaaaatcatggctgat
tcaggaccaatctatgataaaacctatgctggtggtcggttaggattatttgtcttctct
caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa
DBGET
integrated database retrieval system
