Caballeronia sp. NK8: NK8_05540
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Entry
NK8_05540 CDS
T09553
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk01501
beta-Lactam resistance
cabk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK8_05540
01503 Cationic antimicrobial peptide (CAMP) resistance
NK8_05540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabk03036
]
NK8_05540
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabk02000
]
NK8_05540
01504 Antimicrobial resistance genes [BR:
cabk01504
]
NK8_05540
Chromosome and associated proteins [BR:
cabk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NK8_05540
Transporters [BR:
cabk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NK8_05540
Antimicrobial resistance genes [BR:
cabk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NK8_05540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
HH_MFP_RND
Beta-barrel_RND_2
HH_YBHG
YknX_C
BSH_CusB
WxLIP_HBD
HH_AAEA_pHBA
HH_EMRA
LptM_cons
HH_CzcB
DUF1344
Motif
Other DBs
NCBI-ProteinID:
BCQ22444
LinkDB
All DBs
Position
1:590103..591347
Genome browser
AA seq
414 aa
AA seq
DB search
MRVERVPLRLITAATAAVFLAACGQKQSAPPPQTPEVGIVTVQPTSVPVVVDLPGRTNAY
LVAQVRARVDGIVLRREFTEGAEVKAGQRLYKIDPAPYIAALNNAKATLAKAQANVASQN
SLVSRYKVLVAANAVSKQDYDNAVASQGQAVADVAAGKASVDTAQINLGYTDVVSPITGR
TGLSQVTPGAYVQASAATLLTTVQQLDPIYVDLTQSSVDGLKLRRQIQEGRLQTEGLHAA
KVTLVLEDGRTYTEQGKLQFSDVSVDQSTGSVTVRAIFQNKDRVLLPGMFVRARIQEGVN
DHALVVPQIGVTHDQKGTPTALVVNKDDKVELRQLVTSATYGNNWVVDSGLNPGDRVIVN
GVEKAKPGMQVKPVDAKFPYPASDAQAASAPGAAAPANASGASGAQAASAASGA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgaacgggttccactccgcttaatcaccgccgcgacggctgccgtgttcctg
gcagcgtgcggacaaaaacaatcagcacctccgccacaaacgcccgaagtcggcatcgtc
accgtgcagccgacgagcgtgccggtcgtcgtcgatctgccgggccgcaccaacgcctac
ctcgtcgcgcaagtgcgcgcacgggtggatggcatcgtgctgcgccgtgaattcaccgaa
ggcgccgaggtcaaggccggtcagcggctctacaagatcgatccggcgccgtacatcgcc
gcgctgaacaacgcgaaggcgacgctggcgaaggcccaggcgaacgtcgcgtcgcagaac
tcgctcgtgtcgcgctacaaggttctggtcgcggccaacgcggtgtcgaagcaggattac
gacaacgccgtcgcctcgcagggccaggccgtggcggatgtcgcggccggcaaggcatcg
gtggataccgcgcagatcaacctcggctacaccgatgtcgtctcgccgatcaccggccgc
accggactgtcgcaggtcacgccgggcgcgtacgtgcaggcgagcgccgcgacgctgctc
accaccgtgcagcagctcgatccgatctacgtcgacctgacgcaatcgagcgtcgacgga
ctgaagctgcgccgccagattcaggaagggcggctgcagacagaaggccttcacgccgcg
aaagtgacgctcgtgctcgaagacggccgcacctacaccgagcagggcaagctgcagttc
tcggacgtgagcgtcgatcagagcaccggttcggtgacggtgcgcgcgatcttccagaac
aaggaccgcgtgctgctgccgggcatgttcgtgcgcgcccgaattcaggaaggcgtgaac
gaccacgcgctcgtcgtgccgcagatcggcgtcacgcacgaccagaagggcacgccgacc
gcgctcgtcgtcaacaaggacgacaaggtcgaactgcgccagctcgtcacgagcgccacc
tacggcaacaactgggtggtcgacagcggcctgaacccgggcgatcgcgtgatcgtgaac
ggcgtggagaaggcgaagcccggcatgcaggtgaagccggtcgacgcgaaattcccgtat
cccgcatcggacgcgcaggcggcatccgcgccgggcgctgccgctccggccaacgcgagc
ggggcgagtggtgcgcaagccgcatcggccgcttcgggcgcgtaa
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