Caballeronia sp. NK8: NK8_05580
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Entry
NK8_05580 CDS
T09553
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk01501
beta-Lactam resistance
cabk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK8_05580
01503 Cationic antimicrobial peptide (CAMP) resistance
NK8_05580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabk02000
]
NK8_05580
01504 Antimicrobial resistance genes [BR:
cabk01504
]
NK8_05580
Transporters [BR:
cabk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NK8_05580
Antimicrobial resistance genes [BR:
cabk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NK8_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BCQ22448
LinkDB
All DBs
Position
1:597713..600892
Genome browser
AA seq
1059 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIILMLAGLASVTTLPVAQYPTIAPPAIQISANYPGASAQTVENT
VTQVIEQQMSGLDHLLYLSSTSDDSGTATVTLTFAAGTNADIAQVQVQNKLQLATPNLPA
VVQQLGISVTKSSSSFLLVLAFVSEDGSMTRDDLANYVASNVQDPVSRLNGVGTVTLFGS
QYAMRIWLDPNKLTKYNLTPVDVQNALQSQNVQVAGGQLGGVPAVPGQSMQATITEATLL
RTPEQFGNVLLKVSQDGSQVRLRDVARLGLGGENYNFETQYNGRPAAGFGIQLATGANAL
ATANAVRAKIDQLSKFFPHGVVVKYPYDTTPFVKQSIADVIKTLFEAIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAIMGAAGFSINTLSMFGLVLAIGLLVDDAIVVVENVERVM
TEEGLSPKEATKKAMSQITGALVGVALVLAAVFVPVAFTGGSVGAIYRQFSLTIVSAMGL
SVLTAMVLTPALCATMLKPHPKGHEEKKTGFFGWFNRTFAKSQAKYHGGVAHVIKRSGRW
LIIYLVIIVAVGMLFTRLPKAFLPDEDQGTMFVLVATPAGATQEMTQRALDDVAGYLLKK
ESAVVESVFTVNGFSFAGHGQNSGLVFVRLKDFKQRTSANEKVQALVGRTYGTFAGYKNA
LVFPVNPPSIPELGTASGFDFELQDRAGLGHEKLMQARAMLLGMAAKDPTLAQVRPNGLN
DAPQFKVSIDRQKAIAQGVDPSMIDQTFSIAWASKYVNNFLDTDSRIKKVYMQSDAPFRM
SPENINSWYVRNASGSMVPFSSFATTEWSYGSPKLERYNGLSSIEIQGVATPGKSTGQAM
AAMEALAAKLPAGIGYEWTGLSYQQIQSGSQAPILYGISILVVFLCLAALYESWSIPFSV
IMVVPLGVIGALLAVSLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARDLQLSQKMGPI
EAALEAARLRLRPILMTSLAFILGTMPLAISNGAGSGSQHAIGTGVIGGMVTATFLAIFM
VPMFFVVVRARFGGDKEDTDAALARYETQRRAQQGNEGH
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctttatcgatcgcccgattttcgcgtgggtgatcgccatcattctgatg
ctggcgggtctcgcgtcggtcacgacgctgccggtcgcgcagtatccgaccatcgcgccg
cccgcgatccagatttccgccaactatcccggcgcgtcggcgcagaccgtggaaaacacc
gtcacgcaggtgatcgagcagcagatgagcgggctggatcacctgctgtatctgtcatcc
acatccgatgacagcggcaccgcgaccgtcacgctgaccttcgccgccggcaccaacgcg
gacatcgcgcaggtgcaggtgcagaacaagctgcagctcgccacgcccaatctgccggcg
gtcgtgcagcagctgggcatcagcgtgaccaagtcgagcagcagcttcctgctcgtgctg
gcgttcgtgtccgaagacggcagcatgacgcgcgacgacctcgcgaactacgtggcgtcg
aacgtgcaggatccggtgagtcgtctgaacggcgtcggcaccgtgacgctgttcggctcg
cagtacgccatgcggatctggctcgatccgaacaagctgaccaagtacaacctcacgccg
gtggacgtgcagaacgcgctgcaatcgcagaacgtgcaggtcgcgggcgggcagctgggc
ggcgtacccgccgtgcccggccagtcgatgcaggcgaccatcaccgaagcgacgcttttg
cgcacgcccgagcaattcggcaacgtgctgctgaaagtgagccaggacggctcgcaggtg
cgcctgcgcgatgtcgcgcgcctcggtctgggcggcgagaactacaacttcgagacgcag
tacaacggccgtccggcggcgggcttcggcattcagctagcgaccggcgcgaacgcgctc
gccaccgccaacgcggtgcgcgcgaagatcgatcagctttcgaagttctttccgcacggt
gtcgtcgtgaagtacccgtacgacacgacgccgttcgtgaagcagtcgatcgccgacgtg
atcaagacgctcttcgaggccatcgtgctggtgttcctcgtgatgtatctgttcctgcag
aacctgcgcgcaacgttgattccgaccatcgccgtgccggtggtgctgctcggcaccttc
gcgatcatgggggcggctggtttctcgatcaacacgctgtcgatgttcggcctcgtgctc
gcgatcggcctgctggtggacgacgccatcgtggtggtggagaacgtcgagcgcgtgatg
acggaagaagggctttcgccgaaggaagccacgaaaaaggcgatgagccagatcaccggc
gcgctcgtcggcgtggcgctggtgctcgcggcggtgttcgtgccggtggcgttcacgggc
ggctcggtcggcgcgatctaccgtcagttctcgctgacgatcgtctcggcgatgggcctt
tcggtcctcaccgcgatggtgctcacgccggcactgtgcgcgaccatgctgaagccgcat
ccgaaggggcacgaggagaagaagacgggcttcttcggctggttcaaccgcaccttcgcg
aagagccaggcgaagtaccacggcggcgtggcgcacgtcatcaaacgctcggggcgctgg
ctcatcatttatctggtgatcatcgtcgcggtcggcatgttgttcacgcgtctgccgaag
gcgttcctgccggatgaagaccaaggcacgatgttcgtgctggtggccacgcccgccggt
gccacgcaggaaatgacgcagcgcgcgctggacgatgtcgcgggttatctgctgaagaag
gaaagcgccgtcgtcgagtcggtgttcacggtgaacggcttcagcttcgcgggtcatggt
cagaactcgggcctcgtcttcgtgcggctgaaggacttcaagcagcgcacgagcgccaac
gagaaggtccaggcgctggtaggccgcacttacggcacgttcgcaggctacaagaacgcg
ctcgtgttcccggtgaatccgccgtccattccggaactcggcacggcttcgggcttcgac
ttcgagcttcaggaccgcgccggtctcgggcacgaaaagctcatgcaggcgcgcgcgatg
ctgctcggcatggccgcgaaggacccgaccctcgcgcaggttcggccgaacggactgaac
gacgcgccgcagttcaaggtgagcatcgaccgccagaaggcgatcgcgcagggcgtcgat
ccgtcgatgatcgaccagaccttctcgatcgcgtgggcatcgaagtatgtgaacaacttc
ctcgataccgacagccgcatcaagaaggtctacatgcagagcgatgcgccgttccgcatg
tcgccggagaacatcaatagctggtacgtgcgcaatgcgtccggttcgatggtgccgttc
tcgtcgttcgcgacgaccgaatggagctacggctcgcccaagctcgagcgctacaacggt
ttgtcgtcgatcgaaatccagggcgtcgcgacgccgggcaaatccaccggccaggcgatg
gccgcgatggaagcgctcgcggcgaagctgccggccggcatcggctatgagtggacgggg
ctgtcgtatcagcagatccagtccggctcgcaggcgccgattctctacggcatttcgatt
ctcgtcgtgttcctgtgtctcgcggcgctgtacgagagctggtcgattccgttctccgtg
atcatggtcgtgccgctcggcgtgatcggcgcattgctcgccgtgtcgctgcgcggactg
gagaacgacgtgttcttccaggtcggcttgctcaccacggtcgggctatcggcgaagaac
gcgattctgatcgtcgagttcgcgcgcgatctccagctctcgcaaaagatggggccgatc
gaagcggcgctggaagcggcgcgcctgcgtctgcggccgattctgatgacctcgctcgcg
ttcattctcggcaccatgccgctcgcgatcagcaacggcgcgggctcgggcagccagcac
gcgatcggcacgggcgtgatcggcggcatggtgaccgcgactttcctcgccattttcatg
gtgccgatgttcttcgtcgtcgtgcgcgcgcgcttcggtggcgacaaggaggacacggat
gccgcgcttgctcgttatgaaacgcagcggcgtgcgcaacagggcaacgaaggacactga
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