Caballeronia sp. NK8: NK8_08790
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Entry
NK8_08790 CDS
T09553
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NK8_08790 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_08790 (nth)
Enzymes [BR:
cabk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NK8_08790 (nth)
DNA repair and recombination proteins [BR:
cabk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NK8_08790 (nth)
Prokaryotic type
NK8_08790 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BCQ22761
LinkDB
All DBs
Position
1:complement(934444..935088)
Genome browser
AA seq
214 aa
AA seq
DB search
MNATKRRAIYETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT
PATVLALGEDGVSEYIRTIGLYRTKAKNVIATCRILIDQHGGEVPAEREALEALPGVGRK
TANVILNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVETALEKFTPKEFLLDAHHWLI
LHGRYVCKARVPECWHCAIEPLCEYRQKTPAPVE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacgaagcgccgcgccatctacgagactttgcagagcctgaatccgcatccg
acgaccgaactcgaatacacgacgccgttcgaactgctgatcgccgtgatgctgtccgcg
caggcgacggacgtttcggtcaacaaggcgatgcgcaagatgtttcccgtcgccaatacg
ccggcgacggtgctcgcgctgggcgaggacggcgtgtcggagtacatccgcacgatcggg
ctctatcgcacgaaggcgaagaacgtgatcgcgacgtgccgcattctcatcgaccagcac
ggcggcgaggtgccagcggagcgcgaggcgctggaggcattgccgggcgtcggccgcaag
accgcgaacgtcatcctgaacacggcgttcggacagccgaccatcgccgtcgatacgcac
atctttcgtgtcgcgaatcgcacgggtctcgcgcccggcaaggacgtgcgcgccgtcgag
accgcgctcgaaaaattcacgccgaaggaattcctgctcgacgcgcatcactggctgatc
ctgcatggccgctacgtctgcaaggcgcgcgtgcccgagtgctggcattgcgcgatcgag
ccgctctgcgaatatcggcagaagacgcccgcgccggtcgaatga
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