Caballeronia sp. NK8: NK8_14980
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Entry
NK8_14980 CDS
T09553
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk01501
beta-Lactam resistance
cabk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK8_14980
01503 Cationic antimicrobial peptide (CAMP) resistance
NK8_14980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabk03036
]
NK8_14980
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabk02000
]
NK8_14980
01504 Antimicrobial resistance genes [BR:
cabk01504
]
NK8_14980
Chromosome and associated proteins [BR:
cabk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NK8_14980
Transporters [BR:
cabk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NK8_14980
Antimicrobial resistance genes [BR:
cabk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NK8_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CcmD
Biotin_lipoyl
Shadoo
Motif
Other DBs
NCBI-ProteinID:
BCQ23369
LinkDB
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Position
1:complement(1558126..1559346)
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AA seq
406 aa
AA seq
DB search
MEEQGSQRSGNGRRGRLWLAIALVVVVVLIAQGIFSRRAAHAELERDANEHGAQTVEVIK
PARMKASQDLVLAGDIRAYSDAPIFARTNGYLKRWTVDIGTKVKKGQLLAEIDAPEINDQ
LRQARADAQTARANYLLAKTTAERWALMLKNNSVSRQETDEKNGDMLAKEAALNAAQANV
SRLEQLVSFQKIYAPFDGVVTARNTDVGQLIDAGSGAAGRELFHIQDASTLRVFVDVPQA
YARMIAVGLPAELLLNEDRNRKFEGVTVRTAGAVDPVARTMRVEVDVKNPTGELLAGAYA
QVRFRLTSANPSYTLPGNALLFRPDGVHAASVDANNRVKLLPITLGTDYGTRVSIVSGLN
GDERVIVNPPDSIIDGATVRIGHADNGAGASEGAHGGAAKPDGSES
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaggggtcgcaacgatcgggcaacggacggcgagggcgcttatggctcgcg
atcgcgctcgtggtggtcgtcgtgctcatcgcgcaagggattttttcgaggcgcgcggcg
catgcggaactcgaacgcgatgcgaacgagcatggcgcgcagacggtcgaggtcatcaag
ccggcgcgcatgaaggcgtcccaggatctcgtgctcgcgggcgatatccgcgcgtactcc
gatgcgccgatcttcgcgcgcaccaatggttatctgaagcgctggaccgtcgatatcggc
acgaaggtgaagaaaggccagttgctcgcggaaatcgatgcacccgaaatcaacgaccag
cttcgccaggcgcgcgccgatgcgcagaccgcgcgcgcgaactatctgctcgcgaagacg
acggccgaacgctgggcactgatgctgaagaacaactcggtgtcgcgtcaggaaacggac
gagaagaacggcgacatgctcgccaaggaagcggcgctgaatgcggctcaggcgaacgta
tcgcggctcgaacagctcgtttcgtttcagaagatctatgcgcctttcgatggcgtcgtg
acggcgcgcaacaccgatgtcggccagttgatcgatgcgggcagcggcgcggccggccgc
gagctctttcacattcaggatgcttccaccttgcgcgtgttcgtcgatgtgcctcaggct
tacgcgcggatgatcgcggtgggactgcccgccgaactgctgctcaacgaggatcgcaac
cgcaagttcgagggcgtgacggtacgcacagcgggcgcagtggacccggtcgcgcgcacg
atgcgcgtcgaggtcgacgtgaagaatccgaccggcgaattgctcgcgggcgcgtatgcg
caagtgcgctttcgtctcacgagcgcgaacccgtcttatacgctgccgggcaacgcgctg
ctgttccgtcccgacggcgtgcatgcggcgagcgtcgatgcgaacaatcgcgtgaagctg
ctgccgatcacgctcggcacggactacggcacgcgtgtgtcgatcgtctcgggattgaat
ggcgatgaacgcgtgatcgtgaatccgcccgattccatcatcgatggcgcgacggtgcgc
atcggccacgcggataacggcgcgggcgcgagcgaaggcgcgcatggcggcgcagcgaag
ccggacggaagcgaatcgtga
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