Caldithrix abyssi: Cabys_2343
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Entry
Cabys_2343 CDS
T04549
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
caby
Caldithrix abyssi
Pathway
caby01501
beta-Lactam resistance
caby01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cabys_2343
01503 Cationic antimicrobial peptide (CAMP) resistance
Cabys_2343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caby03036
]
Cabys_2343
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_2343
01504 Antimicrobial resistance genes [BR:
caby01504
]
Cabys_2343
Chromosome and associated proteins [BR:
caby03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cabys_2343
Transporters [BR:
caby02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cabys_2343
Antimicrobial resistance genes [BR:
caby01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cabys_2343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
She9_MDM33
PCRF
Terminase_4
KxDL
LAMININ_IV_B
HSR
FapA
Nup49_C
DRY_EERY
Allexi_40kDa
TMPIT
DUF6468
Motif
Other DBs
NCBI-ProteinID:
APF19092
UniProt:
H1XWQ1
LinkDB
All DBs
Position
complement(2801133..2802239)
Genome browser
AA seq
368 aa
AA seq
DB search
MQKTIIWFMLLAFLFACQKKTEQSAERAVPVSVLVIKPDSIRTFIEITGSLQASNDALVY
SRLSEEVKEIVKPVGSKVRKGAVIVRLDDSMVLQAKKQAEAALASARARYQKVKQDFERY
QRLYKQQAISQQQWQQMQAAMQEAEAALRQMEANLAQVSEQFEHSLIKAPFDGLVGSVYF
DVGQMAAAGQPVVKIINPDLMKAKLYIPDSYYHRLKVGQKVYAHFPAQAGKEFTGQVIRI
DRAIDPTSRTVAVEAIFPNEHGLLTSGLYGLFKIELQVRRRTVVVPDNAILSQTSVRVDP
QTGKPTAHRKYYAFVVKQGRAAQTEVRTNLSAGDRIEVVQGLSFGDSLIVVGQRMIKDGQ
KTKVVEAY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgattatctggttcatgctgctggcttttttatttgcctgccagaagaaa
acagagcaaagcgctgaacgggccgttcccgtcagtgtgctggttataaagcccgattcc
attcggacctttattgagattaccggcagtctgcaggccagtaatgacgctctggtgtac
agtcggctttcggaagaggtaaaagaaatcgtaaagcccgtgggcagtaaggtgcggaaa
ggggcggttattgttcgcctggacgattccatggtgctgcaggctaaaaagcaggccgaa
gcggcgcttgcttcggccagggcgcgttatcaaaaggtgaagcaagattttgaacggtat
caacgcctgtacaaacaacaggccattagccaacagcagtggcagcaaatgcaggccgcc
atgcaggaagccgaagccgctttaaggcaaatggaagcaaacctggctcaggtcagcgaa
caatttgagcacagcctgattaaagcgccgtttgacggtctggtaggcagcgtctatttt
gatgtgggacagatggcggccgccggacaaccggtggttaaaatcattaatcccgattta
atgaaggccaaactctacattcccgatagttattaccatcgtttaaaggtcggccaaaag
gtttacgctcacttccccgcgcaggccggaaaggaatttacgggccaggttattagaatc
gaccgggccattgatccgaccagtcgcacggttgccgtggaagccattttccccaacgaa
cacggccttttaacctctggtttgtacggactgttcaaaatagaattgcaggtccgtcgc
cggacggtggtggttccggataacgccattctttcgcaaaccagtgtgcgtgtggatcca
caaaccggcaaacccaccgcccaccgtaaatactacgcttttgtcgtaaagcagggaagg
gcggcgcagaccgaagtccgtaccaacttaagcgccggcgaccgcatcgaagttgtccag
ggcttaagctttggcgattctctgattgttgtgggacaacggatgattaaagacgggcag
aagacaaaagtggtggaagcgtattga
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integrated database retrieval system
