Caldithrix abyssi: Cabys_3524
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Entry
Cabys_3524 CDS
T04549
Name
(GenBank) Serine phosphatase RsbU, regulator of sigma subunit
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caby03021
]
Cabys_3524
Enzymes [BR:
caby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
Cabys_3524
Transcription machinery [BR:
caby03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cabys_3524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoIIE
HATPase_c_2
HAMP
HATPase_c
HTH_32
HTH_23
HTH_7
HTH_28
DUF1858
Motif
Other DBs
NCBI-ProteinID:
APF20270
UniProt:
H1XSU4
LinkDB
All DBs
Position
complement(4199084..4202689)
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AA seq
1201 aa
AA seq
DB search
MFKNVRKEEITIPAQMSYLTQVRDFIERIGKKFRFDDKIINSFKLVVDEACTNIIRHGYR
DIKNGEITIKAIIRRLSLTIIIIDQGISYDPRQANTPDLDKYIKIGKKGGLGILMMRKLM
DDMQYAVTERGNELRLTKFRDQTHEPLLLEKWNALNLKAKYSILASIIFTIIALLFFVPI
YYNTEKNIRNDIYTLSATAGEALAANIVDDMLAENSAILFEKAYKVRASHPTFIYEVFIV
DADSSLLAWSNPEKIYPFKKLAFKPVAEKPDTVQRAVLSTYQVNDTLTVKDLSIPVKMTN
GLQLGEVHVWVNEKTIEDLVFNKKLRLIIVLMIILIAGYVPIFFLIHRILQPFHSLAEWV
RQVVHGKVDQDEIDIDASDEIGEIAQAFNEMTNKFREAQVTLVEQQKLQKELQVAQEIQQ
MLLPSDFPKVEGYDIASYYEAAKEVGGDLFDFVEVDDDTIGICVADVSGKGVPGSMIMTM
IRTALRLEARGNKNPADVLARVNEFVVDDMKRGMFVTMFYVVLDSRNREIHFASAGHNPM
ILYRNSTKQTYYLNPPGFPVGIQLPDPDLFRRTITSESIRLREDDILVLYTDGVTEAMNR
KRELYREERFLDSIRRNAHLSVVEFIKTINKELKEFTGGAPQNDDITVVAIREKMMPSEV
IIRTQQELKKLIDSGMKVKDALAKLKVSPAHYYRYKNIIESKGLNALKEFLSVMDDPIEK
KHLSIEVKTKIYDIVRKHPEFGPKLIAYELRRDEYGNIKVDPDRIYDELVRMRLNTETLR
RRWIEKGGTRPLKQPGTPLLTLDGQVILNFESSAQVVAQRMGKTIATPVPEEERAHKPLK
RSIQLVSEESEKETTEEQAEKTAEEVSEKEASPAAETAAPETVEAAKTDDADEARVETPL
SEKAESEEDSEEIVEEELVEKTEESSTKKETIAGTVEQSESVTSELAEAESGPENEPDVE
EAAPAEIKEDEERAKEPAAEAKTDQTPEETAIASDMKKIEDTSAFLQSPGPAEPESAGKE
LIGNAYSAAELRKMMADKYESDRAEEFFRLVKDDYNQIIELLDSAVKSDHLPNVINKINI
LLKIIKTHPMLKKDEMQAIRQLFVEMHSLFSFYKLRFDELEREEILQGVKLILNYFKNNN
IFASYDKLIETINAVGIMNFQLIRAYQQKQVSADNPLQRLREQLKNKKIISDDAIVGQKT
K
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaacgtccgaaaagaagagattaccattcccgcccagatgagttacctgact
caggtgcgggatttcatcgaaagaatcgggaagaagttccggtttgacgacaaaattatc
aattcttttaaactggtggttgatgaggcctgtaccaatatcatccgccatggctatcgc
gatattaaaaacggtgaaattacgatcaaggccatcattcgcaggttaagcctgaccatt
atcatcatcgaccagggaattagttatgacccccgccaggccaatacacccgacctggac
aagtacattaaaatcggcaaaaaaggcgggctgggcattttgatgatgcgcaagctaatg
gacgatatgcagtatgccgtaaccgagcgaggaaatgagctgcgcttgaccaagttccgg
gatcagacccatgagccgttacttctggaaaagtggaatgcgttaaatttaaaggctaaa
tattcgattctggccagtattatttttaccattattgcgctgttgttttttgtgcccatc
tattacaatactgagaaaaatatcaggaacgatatttacacgctttcggcgacagccggc
gaagcgcttgccgccaatattgttgacgatatgctggcggaaaattcggcgatcctgttc
gaaaaagcttataaagtaagggccagccatcctacctttatttacgaggtgtttatcgta
gatgccgatagctcgcttctggcctggagcaatccggaaaaaatttatccttttaaaaag
ttggcgttcaaaccggtcgcagaaaagcccgacaccgttcagcgggcggttctgtcaacc
tatcaggttaacgatacgttaacggttaaagacctgtcgattccggtaaaaatgacgaac
ggtctgcaactgggcgaagtgcacgtttgggtgaatgaaaagaccattgaagacctggtt
ttcaacaaaaaactgcgtttgatcatcgtgttaatgatcattttaatcgcaggttatgtg
cccatcttttttctcatccatcgtattttacagcctttccacagtctggccgaatgggta
cggcaggtggtgcacggcaaggtggatcaggacgaaatcgatattgacgcctccgatgaa
atcggtgaaattgctcaggcctttaatgagatgaccaataagtttcgtgaagcgcaggtc
actctggtcgaacagcaaaagctgcaaaaagagttgcaggtggcgcaggaaattcagcaa
atgctcctgcccagtgattttcccaaagtggaaggctacgacatcgcctcttactacgag
gcggccaaagaggtgggcggcgatctgttcgattttgtggaagtggacgacgacaccatt
ggcatttgcgtggccgatgtttccggtaagggcgtgcccggctccatgattatgaccatg
atccggacggcgctgcgtcttgaggcgcggggcaataaaaatccagccgatgtactggcg
cgcgtgaatgagtttgtggtggatgacatgaagcgcggcatgtttgtgaccatgttttat
gtggtgctcgactcgcgtaaccgggagattcattttgccagcgccggtcataatcccatg
atcctttaccgcaattctaccaagcaaacctactatttgaatccgccgggctttccggtg
ggaattcaattgcccgatccggacctttttcgtcgcaccattacctccgaatccatccgc
ctgcgtgaagacgacatcctggtgctttacaccgatggcgttacggaagccatgaaccgt
aaacgcgaattgtaccgcgaagaacgttttctggattcaatccgccgaaacgcgcatttg
agcgtggtggagtttattaaaacgatcaacaaagaactaaaggaatttactggcggggca
ccgcaaaatgacgacattacggtagtggccattcgtgaaaagatgatgcccagcgaggtc
atcatcagaacgcagcaagagcttaaaaagctgatcgattccggtatgaaggttaaagac
gccctggctaagttgaaagtttcgcccgcccattattaccgctacaaaaatattatcgaa
agcaagggattaaatgctcttaaagaattcctttcggtaatggacgatccgatcgagaaa
aaacatttaagcattgaggttaaaacaaagatttacgacatcgtccgaaagcatccggaa
tttgggccaaagctcatcgcctacgaattgcgcagagatgagtatggcaatataaaagtg
gatccggacagaatttatgatgaacttgtgagaatgcgcctgaacaccgaaaccctgagg
cgacggtggattgaaaaaggcggaacgcgtccgctgaagcagccaggaaccccgctgtta
accctggatggtcaggttattttgaattttgaatcaagcgctcaggtggtggcacaacgc
atgggtaaaactattgccacgccggtgccggaagaggagcgcgcgcacaagcctcttaaa
agatccattcaactggtgagcgaagaatcagaaaaggagacgacggaggaacaggcagaa
aaaacggccgaggaagtttccgaaaaagaagcgtcgcccgctgcagaaacagcggctccg
gaaacggtagaagcggcaaagaccgacgacgcggatgaagcccgggttgaaaccccttta
tctgaaaaggcggaaagcgaagaggattccgaagagatcgttgaagaagagctggttgag
aaaaccgaagaaagttcaacaaaaaaagagaccatcgcggggactgttgaacaatcagaa
agcgtaaccagcgaactggcggaagcggaatctggcccagaaaatgaaccggacgttgaa
gaggcggcgccagcggaaataaaagaggacgaagagcgggctaaagaacctgcggcagaa
gcgaaaacagaccagacgcccgaagaaacggccatcgcttccgatatgaaaaaaatagag
gatacctcagcctttttacagagtcccggccctgcagaaccggaatccgccggaaaggaa
ttgattggcaatgcctattcggccgccgaactgcgaaagatgatggcagataaatatgag
agcgatagagcggaagagtttttccggttggttaaagacgattacaaccaaatcattgag
ttattagattctgccgtcaaatccgatcacctgcccaacgtgatcaataaaatcaatatt
ttgttaaaaattattaaaactcatccgatgttaaagaaagatgagatgcaggcaataagg
cagttatttgtagagatgcacagtttgttttctttttacaaattgcgttttgatgaattg
gaaagggaggaaattttacaaggcgttaaacttatattgaattatttcaaaaataataat
atatttgcatcttacgataagttaatagagaccataaatgcagtaggaataatgaatttc
caattaataagagcctatcaacaaaaacaagtttctgccgataatcctttgcaacgcctg
agggagcaattaaaaaataaaaaaataatttctgatgatgcgatagtggggcagaaaaca
aaataa
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