Caenibius sp. WL: K5X80_00025
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Entry
K5X80_00025 CDS
T08345
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
caen
Caenibius sp. WL
Pathway
caen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5X80_00025 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_00025 (nth)
Enzymes [BR:
caen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K5X80_00025 (nth)
DNA repair and recombination proteins [BR:
caen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K5X80_00025 (nth)
Prokaryotic type
K5X80_00025 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QZP08256
LinkDB
All DBs
Position
3951..4637
Genome browser
AA seq
228 aa
AA seq
DB search
MKKDTIFEFFRILAEHNPAPETELEFTNTYQLLVAVVLSAQATDVGVNKATRKLFEEVKT
PAQMVALGEEGLKQHIKTIGLFNSKAKNVIALSEILDRDFGGEVPQDRDTLTTLPGVGRK
TANVVMNCAFGAETFAVDTHVFRVSNRTGLAKGKTVEKVEALLEKRVPQPFRRDAHHWLI
LLGRYTCKARVPECWRCLVVEQCEFRHKVLEPKPAARITKARGRAAPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggacaccattttcgaattcttccgcattctggcggaacacaatcccgcgccc
gaaacggagctggaattcaccaacacctatcagttgctggtggcggtcgtgctgtccgcg
caggccaccgatgtcggggtcaacaaggccacgcgcaagctgttcgaagaggtcaagact
ccggcgcagatggtcgcgctgggcgaagaagggctgaaacagcacatcaagaccatcggc
ctgttcaattccaaggccaagaacgtgatcgcgctgtccgaaatcctcgaccgcgatttc
ggcggcgaggttccgcaggatcgcgacacgctgaccacgctgcccggcgtcggccgcaag
accgccaatgtggtgatgaactgcgcgttcggcgcggaaaccttcgcggtcgatacccat
gtcttccgtgtcagcaaccgcaccggcctcgccaagggcaagacggtggagaaagtcgag
gccctgctcgaaaagcgcgtgccccagcctttccgccgcgatgcgcatcactggctgatt
ctgctgggccggtacacctgcaaggcaagggtcccggaatgctggcgctgcctggtggtg
gaacagtgcgagtttcgccacaaggtattggaaccaaagcccgccgcgcgtattaccaag
gcacggggacgcgcggccccggcctga
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