Citrobacter amalonaticus FDAARGOS_165: AL524_22035
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Entry
AL524_22035 CDS
T04738
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Pathway
caf00300
Lysine biosynthesis
caf00550
Peptidoglycan biosynthesis
caf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AL524_22035
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AL524_22035
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caf01011
]
AL524_22035
Enzymes [BR:
caf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AL524_22035
Peptidoglycan biosynthesis and degradation proteins [BR:
caf01011
]
Precursor biosynthesis
Amino acid ligase
AL524_22035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AMG55552
UniProt:
A0A381G3N5
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All DBs
Position
complement(4596416..4597903)
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AA seq
495 aa
AA seq
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MADRNLRDLLAPWVSGLPARELREMTLDSRVAAAGDLFVAVKGHQADGRRYIPQAIAQGV
AAIIAEAKDEATDGEVREMHGVPVIYLSQLNERLSALAGRFYHEPSENMRLVGVTGTNGK
TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQQVLSGLVDQGATLC
AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLFSTHRCGQAIIN
ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKAVEVNYHDSGATIRFSSSWGEGEIE
SRLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFSAPGKTTVVVDYAH
TPDALEKALQAARLHCTGQLWCVFGCGGDRDKGKRPLMGAIAEEFADVVVVTDDNPRTEE
PRAIIDDILAGMLDAGRAKVMEGRAEAVTNAIMQAKDNDVVLVAGKGHEDYQIVGTQRLD
YSDRVTAARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgaccttcttgctccgtgggtatcaggtttacctgcgcga
gaactgcgagagatgacactcgacagccgtgtggctgcggcgggcgatctctttgtggca
gtgaaaggtcatcaggcggacgggcgtcgatatatcccgcaggcgatagcgcaaggtgtg
gctgccattattgcagaggcaaaagacgaggcaaccgacggtgaagtgcgtgaaatgcac
ggcgtaccggttatctatctcagccagcttaacgagcgtttatctgcgctggcgggccgc
ttttatcacgagccatctgaaaacatgcgtctggtcggcgtcaccggcacgaacggtaaa
accaccacgacccaactgctggcgcagtggagccaactgctcggcgaaaccagcgcagta
atgggcacggttggaaacggtctgctcggtaaagtgatcccaacggaaaataccaccggc
tcggccgtagacgttcagcaggtgctgtcggggctggttgatcagggtgcgactctgtgc
gcgatggaagtctcttcccacggtctggtgcagcatcgcgtcgcggcgctgaaatttgcc
gcctcggtgtttaccaatttaagccgtgaccatctggattatcatggcgatatggagcat
tacgaagccgcgaaatggctacttttctccacgcaccgttgtgggcaggcaattatcaac
gcggatgatgaagtcggtcgccgttggctggcgaaactgccggatgccgtggccgtctca
atggaagatcatatcaaccctaactgtcatggccggtggctgaaggccgtcgaggtgaat
tatcacgacagcggcgcgaccatccgcttctcctcaagctggggcgagggtgaaattgaa
agccgtctgatgggcgcgtttaacgtcagtaatctgttgctggcgctggccacgctgctg
gcgctgggctatccactggctgacttgttgaaaactgctgcgcgtctgcaacccgtttgc
gggcgtatggaagtctttagcgcgccgggtaaaaccaccgtggttgtcgattatgcccat
acccctgatgcgctggaaaaagcgctacaggcggcgcgtctgcactgcaccgggcaactc
tggtgcgtctttggctgcggcggcgatcgtgacaaagggaagcgcccactgatgggggcg
attgccgaagagttcgctgatgttgtggtcgtaacggacgacaacccgcgtactgaagag
ccgcgcgccattatcgacgacattctggcaggtatgctggatgctggtcgtgcaaaagtg
atggaaggccgtgccgaagcggtgaccaacgccattatgcaggcgaaagataacgatgtc
gtgctggtggcaggtaaagggcacgaggattaccagattgtcggtacgcagcgtctcgac
tattccgaccgcgtaactgcggcgcgcctgctgggggtgatcgcatga
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