Corynebacterium afermentans subsp. lipophilum: CAFEL_04040
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Entry
CAFEL_04040 CDS
T09361
Symbol
yhcR1
Name
(GenBank) Endonuclease YhcR precursor
KO
K01081
5'-nucleotidase [EC:
3.1.3.5
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00230
Purine metabolism
cafe00240
Pyrimidine metabolism
cafe00760
Nicotinate and nicotinamide metabolism
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CAFEL_04040 (yhcR1)
00240 Pyrimidine metabolism
CAFEL_04040 (yhcR1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CAFEL_04040 (yhcR1)
Enzymes [BR:
cafe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
CAFEL_04040 (yhcR1)
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Big_2
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WJY58585
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All DBs
Position
complement(833738..835714)
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AA seq
658 aa
AA seq
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MSARFRIQLISATTAAALATAFTPLAPAAMAAETSEFTISNVTDFHGYWEETKNVPGAAH
LKCAVDEAAAGKTHVFTSAGDNIGASPFASKLLNDAPTLEILNLMNLQVSALGNHELDEG
AAEFSDRVTAAAKFDYLAANAKTVKNTKDYVVKDLDGAKVAFVGTITDDMPNLVNPKSIE
GIAWNDPVATTNKLAEQLKDSGEADVVIALVHEGGIKADEFSDAVDVAFLGHSHQSIEPT
GEKPLLIQAGSYGANLANVDLSFDRATKKLTVRNAELLDADTIRACDTPQPEIDAVVKDA
LAKAGTEGKKVIGHTDEDLYKAGDKESQLNNYIAEATRQGVTQNSSVTADIGVMNAGGVR
AELEAGDVTYEQAFSVQPFGGENTYVELKGSDVVQALEEQWRDDPDRPMFPLGISDNVSY
TYDPAAPVGSKITSVTVDGAPIDPEKTYVVAGSTFLLAGGDNFKAFTKGSEPANLGYVDL
NALVEALSSGQKQRTGQSNVGVHLPAPLTAGKEATIELSSLLFDKGEAATTATASLGDAS
GSATISPNNGDMTANEYGTATVKLTVPAGMSGAQELRITTDAGTEVTVPVEVAPAAGQAE
PSKPAPSTPEPAADNGSSSGNLGWIIPVALAGAFGLANLVALLFPFAVDGVLGPIAKR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcccgcttccgcatccagctgatctccgcgaccaccgccgccgccctcgccacc
gccttcacgcccctcgccccggcggcgatggcggccgagacctccgaattcaccatctcc
aacgtcaccgatttccacggttactgggaagagacgaagaacgtcccgggcgccgcccac
ctcaagtgcgccgtggacgaggccgccgcgggcaagacccacgtcttcacttcggccggc
gacaacatcggcgcctcccccttcgcgtccaagctgctgaacgacgcccccaccctggag
atcctcaacctgatgaacctgcaggtctccgcgctgggcaaccacgagctcgacgagggc
gccgctgagttctccgaccgcgtcaccgcggccgcgaagttcgactacctcgccgccaac
gccaagaccgtgaagaacacgaaggactacgtggtcaaggacctcgacggcgcgaaggtc
gccttcgtgggcaccatcaccgacgacatgccgaacctggtcaacccgaagtccatcgag
ggcatcgcctggaacgacccggtcgcgaccacgaacaagctcgccgagcagctaaaagat
agcggcgaggccgacgtggtcatcgcactcgtgcacgagggcggcatcaaggccgacgag
ttctcggacgccgtcgacgtggcgttcctcggccactcgcaccagtcgatcgagcccacc
ggcgagaagccgcttttgatccaggccggctcctacggcgccaaccttgccaacgtggac
ctgagcttcgaccgcgccaccaagaagctgaccgtgagaaacgccgagcttctcgacgcc
gacacgatccgcgcctgcgacaccccgcagcccgaaatcgacgccgtggtcaaggacgcg
ctggcgaaggccggcaccgagggcaagaaggtcatcgggcacacggacgaggacctgtac
aaggcgggcgacaaggagtcccagctcaacaactacatcgcggaagcgacccgccagggc
gtgacccagaactcgtcggtcaccgccgacatcggcgtgatgaacgcgggcggcgtccgc
gccgagctcgaggccggcgacgtcacctacgagcaggcgttttccgtccagccgttcggc
ggcgagaacacctacgtcgagctgaagggctccgacgtggtacaggcgctggaggagcag
tggcgcgacgacccggaccgccccatgttcccgctgggcatttccgacaacgtctcctac
acctacgacccggccgcgccggtcggttccaagatcacctccgtcaccgtcgacggcgcc
ccgatcgacccggagaagacctacgtggtggccggctcgaccttcctgctcgccggcggc
gacaacttcaaggccttcaccaagggttccgagcccgcgaacttgggctacgtggacctc
aacgcgctggtggaggcgctcagctccggccagaagcagcgcaccggccagtcaaacgtg
ggcgtccacctccccgccccgctcaccgcgggcaaggaagcaaccatcgagctcagctcc
ctcctcttcgacaagggcgaggccgccaccaccgccaccgcatcgcttggcgacgcctcc
ggttccgccaccatctcccccaacaacggcgacatgaccgccaacgagtacggcaccgcc
accgtgaagctgaccgtcccggcggggatgtctggcgcccaggagctgcgcatcaccact
gacgccggcaccgaggtgaccgtccccgtcgaggtcgcgcccgccgcggggcaggccgag
ccgagcaagcccgccccgagcacgccagagcccgctgccgacaacggctcgagctccggc
aacctcggctggatcatcccggtggcgctcgcgggcgccttcgggctcgccaacctggtg
gccctgctgttcccgtttgcggtagacggggtgctggggccgatcgctaagcgctag
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