Corynebacterium afermentans subsp. lipophilum: CAFEL_05635
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Entry
CAFEL_05635 CDS
T09361
Symbol
dop
Name
(GenBank) Pup deamidase/depupylase
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cafe03051
]
CAFEL_05635 (dop)
Enzymes [BR:
cafe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
CAFEL_05635 (dop)
Proteasome [BR:
cafe03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CAFEL_05635 (dop)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WJY58895
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All DBs
Position
complement(1179964..1181463)
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AA seq
499 aa
AA seq
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MTRYLGTETEYGITCPDNPQISPLVTSTHAVVAYAALRTQARTRWDYAEEAPLKDARGFN
LQRYRSVPVVDANAIGVANVVTTNGARYYVDHGHPEYSSPECSNAFDAMVFDAAGDIVLN
DAAACIRELWEQQVSVLAKHEPCPPLKFYKNNVDGKGRSYGSHENYLYSRHTNFENLTQA
LIPFFVTRQVIIGAGRVGIGQESQEPGFQISQRADYFEQEVSLETTLNRGIVNTRDEPHA
PEEEFRRLHVIVGDANMSQFSNFLKLGMTSLVLDAIEAGVDFSDLRLKSPVEEIKAVSHD
PTLQYELELLDGQRMSAISILREYRRKCDGRGDVDKQVLTMWGEVLDDLERDPLSTADRL
DWTAKWALVRRFGQRGATQAKLQAIDLQYADIDPKTSLYHALVRKGAMRTLVSAEEIARA
AVHPPEDTRAYFRGRAGEKFAEDLTASNWQSMLFTVDGQLYRVPLDLLGSHTKADVGELI
ENSATTRDLLSGLGLAPER
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttacttgggaaccgagacggagtacggcatcacctgcccagacaacccgcag
atcagcccgctggtcacctccacgcacgcggtggttgcctacgcggcgctgcgcacccag
gcccgcacccgctgggactatgcggaagaagcaccgctgaaagacgcccgcggcttcaac
ctgcagcgctaccgcagcgtgccggttgtggacgcaaacgcgatcggggtggccaacgtg
gtcaccaccaacggcgcgcgctactacgtcgaccacgggcacccggagtactccagcccg
gagtgctcgaacgccttcgacgccatggtctttgatgccgccggcgacatcgtcctcaac
gacgccgccgcctgcatacgcgagctgtgggagcagcaggtctccgtgctagccaagcac
gagccgtgcccgccgctgaagttctacaaaaacaacgtcgacggcaagggccgctcctac
ggcagccacgagaactacctgtactcgcgccacaccaacttcgaaaacctcacccaggcg
ctgatcccgttcttcgtcacccgccaggtcatcatcggcgcgggccgggtgggcatcggc
caggagtcgcaggagccgggcttccaaatctcccagcgcgcggactacttcgagcaggag
gtttcgcttgagaccacgctcaaccgcggcatcgtcaacacgcgcgacgagccgcacgca
cccgaggaagagttccgccgcctgcacgtcatcgtgggggatgcgaacatgagccagttc
tccaacttcctcaaactcggcatgacctcgctcgtactcgacgcgatcgaggccggagtg
gatttctcggacctgcgcctgaaaagcccggtcgaggagatcaaggcggtcagccacgac
cccacgctgcaatacgagcttgagcttctcgacggccaaaggatgtccgcgatctccatc
ctccgtgaatacaggagaaagtgcgacgggcggggcgacgtcgataagcaagtgctcacg
atgtggggcgaggtcctcgacgatctcgagcgcgacccgttgtccacggccgatcgtctg
gattggaccgcgaagtgggcgctggtgcgcaggtttgggcagcgcggcgcaacccaggcg
aagctgcaggcgattgacctgcagtacgcggacatcgacccaaagacgtccctgtaccac
gcgctggtgcgcaagggcgcgatgcgcacgctggtcagcgccgaagagatcgcgcgcgcc
gcggtgcacccgccggaggacacccgcgcctacttccggggacgcgccggcgagaagttc
gccgaggacctaacggcgtcgaactggcagtccatgctgtttaccgtggacgggcagctc
taccgggtacctctggacctgctgggcagccacacgaaagcggacgtgggggagttaatc
gaaaactctgcgacaacacgcgacctgctttctggcctggggctggccccagaacgctaa
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