Corynebacterium afermentans subsp. lipophilum: CAFEL_08275
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Entry
CAFEL_08275 CDS
T09361
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00270
Cysteine and methionine metabolism
cafe00450
Selenocompound metabolism
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01230
Biosynthesis of amino acids
Module
cafe_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CAFEL_08275 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CAFEL_08275 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cafe01007
]
CAFEL_08275 (patB)
Enzymes [BR:
cafe01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
CAFEL_08275 (patB)
Amino acid related enzymes [BR:
cafe01007
]
Aminotransferase (transaminase)
Class II
CAFEL_08275 (patB)
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Ortholog
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
NIR_SIR_ferr
DUF6372
Osmo_CC
Motif
Other DBs
NCBI-ProteinID:
WJY59410
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All DBs
Position
1735139..1736260
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AA seq
373 aa
AA seq
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MQFPDLHTLQARGTRKWTQFNPDVLPLFIAESDFPTAPAVKQAIVDAAEREMFGYTPAPH
AHRLGEAVAGFYADRYGWRPDAEKIFPVADVVRGVMLAIQYFTEGDVVVPVPAYFPFLDV
AEVAGRKRIDVSSAGGLDLAEVETAFQNGAGSIIVTNPFNPGGYVFTEEQLDEVCALARK
YGARVIVDEIHAPLVYDGTHVCAAANNPDVCITVTATSKAWNVAGLKCAQIIFSNDEDAK
TWNAMSGVAKDGVGTLGIVAAEACYDHGREFLDEEIAQLKANRDWLVEHLPKAVPGIEIE
VPAATYLMFLNFKNTKLVDEKPAAWLRRHAKVAMNEGMDFGPGGEHRARMNFATSPEILE
EAVRRIGGAVAKL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccgatcttcacactctgcaagcccgcggcacgaggaagtggacgcagttc
aatcctgacgtgctgccgctgtttatcgcggagagcgattttcccaccgcgcccgctgtg
aagcaggcgattgtggatgctgccgagcgcgagatgttcggctacacgcccgccccgcac
gcgcaccgcctgggcgaggcggtcgccggcttctacgcggaccgttacggctggcgccct
gacgcggagaagatcttcccggtcgcggacgtggtgcgcggcgtgatgctggccatccag
tacttcaccgagggcgatgtggtggtcccggttcccgcctacttcccgtttttggatgtt
gcggaggtcgcggggcgcaagcgtatcgacgtcagctccgccggcggcctcgatctggcg
gaagtggaaaccgcgttccaaaacggcgcgggcagcatcatcgtgaccaacccgttcaac
ccgggcggctacgtgttcaccgaggagcaactcgacgaggtctgcgcgttggcgcgcaag
tacggcgcccgggtgattgtggacgagattcacgccccgctggtctacgacggcactcac
gtctgcgccgcggcgaacaacccggacgtgtgcatcacggtcaccgccacctccaaggcg
tggaacgtcgcgggcctgaagtgcgcgcagataattttttccaacgacgaggacgcaaag
acctggaacgcgatgtcgggcgtggcgaaggacggtgtgggcaccctgggcatcgtcgcg
gcggaggcctgttacgaccacggccgcgagtttctggacgaggagatcgcccagctcaag
gccaaccgcgactggctggtggagcacctgccgaaggcagtgccgggtattgagattgag
gtgccggcggcgacgtatctgatgtttttgaatttcaagaacaccaagcttgtcgacgaa
aaacccgccgcgtggctgcgccgccacgccaaggtggccatgaacgagggaatggacttc
ggccccggcggcgagcaccgcgcgcggatgaacttcgccacctccccggagatcctggag
gaggcggtgcggcggattggcggagccgtcgcaaagctttag
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