Campylobacter iguaniorum: CIG1485E_1157
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Entry
CIG1485E_1157 CDS
T03252
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
caj
Campylobacter iguaniorum
Pathway
caj03030
DNA replication
caj03410
Base excision repair
caj03420
Nucleotide excision repair
caj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIG1485E_1157 (ligA)
03410 Base excision repair
CIG1485E_1157 (ligA)
03420 Nucleotide excision repair
CIG1485E_1157 (ligA)
03430 Mismatch repair
CIG1485E_1157 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caj03032
]
CIG1485E_1157 (ligA)
03400 DNA repair and recombination proteins [BR:
caj03400
]
CIG1485E_1157 (ligA)
Enzymes [BR:
caj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CIG1485E_1157 (ligA)
DNA replication proteins [BR:
caj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIG1485E_1157 (ligA)
DNA repair and recombination proteins [BR:
caj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CIG1485E_1157 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIG1485E_1157 (ligA)
MMR (mismatch excision repair)
DNA ligase
CIG1485E_1157 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CIG1485E_1157 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
HHH_5
DNA_ligase_ZBD
RNA_lig_T4_1
PTCB-BRCT
BRCT_2
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AII14991
UniProt:
A0A076FAJ9
LinkDB
All DBs
Position
complement(1160002..1161936)
Genome browser
AA seq
644 aa
AA seq
DB search
MDKIEYEKAITSLNLWAKAYYTDDKPIASDAEYDELYRQVEQFEEQNPSLKLSYSPTNRV
GGAVLDEFKKSTHLAKMWSMEDIFSDDELLAWIGHGDKSGEFFAEPKFDGASLNLLYENG
KLIKAATRGDGSIGEDVTNNALVINSIPLQISYLGRIEIRGEVVIEKSDFESINAIRAAS
GEPPLANPRNAAAGSLRQLDNSVVKQRKLKFYPWGVGENSLEFAKHSEVMDFVRSLGFLR
DEFCKICSSVDELRNAYKELVSKRDEKPILIDGMVIRVNDLSRANSLGYTVKFPKFMVAY
KFPAIEKTARLIDIVLQVGRTGVVTPVGLLDGVNIDGAFVKNVTLHNFDEINRLGLMKND
LVTIIRSGDVIPKITGVFAERRDGSQTPISRPTNCPQCGSELLDEGVFIKCQNLSCKARV
VSSIIYFTSKKCMNIDGLGEAIVELLYERGIVQNIADIYRLDELSFMGIEGFKTKKISNL
LNAIELSKTPNLERFITSLGIEHIGEVAAKKIAIAYPDNWLELSFEELISLDGFGEAMAL
SYLEFMRVNLDKIKELLGFITPKIVEIKTTQNAFSGKTFVITGTLSRPRDEIKAELESFG
AKVSGSVSSKSDYVLYGDEAGSKLEKALSLGVKTINEQEYEALK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattgaatatgaaaaagctatcactagcctaaatttatgggcaaaagcatac
tacacagacgataagcctatcgcaagtgacgctgaatatgatgagctttacaggcaagta
gagcagtttgaagagcaaaatccaagtttgaagcttagctattctcctacaaatagagtt
ggcggagcggtgcttgatgagttcaaaaaatccacgcatttagccaaaatgtggtcgatg
gaagatatttttagcgacgatgagcttctagcatggatagggcacggagacaagagtgga
gagttttttgctgagcctaaatttgacggggcgagcctaaatttgctttacgaaaatggc
aaactaataaaagccgcgacaagaggcgatggaagcataggcgaagatgtgacaaacaac
gctctagtcataaactcaatcccgcttcaaatctcatatctaggcagaatcgaaatccgt
ggcgaggtcgtcatagaaaaaagtgattttgaatccataaacgccataagagctgcgagt
ggtgagccaccacttgccaatccaagaaatgcagcagcggggagccttagacagcttgat
aatagcgtggtaaaacagcgaaaacttaaattctatccatggggtgttggtgagaactca
cttgagtttgctaagcattctgaagtgatggatttcgtgcgtagtcttgggtttttgaga
gatgagttttgcaaaatttgctctagcgttgatgagcttagaaatgcttataaagagctt
gtaagcaaaagagatgaaaagcctattttaatagatggaatggttattcgggtaaatgat
ttaagcagggcaaactcgcttggatatactgtgaagtttcctaaatttatggtggcttat
aaattcccagccatagagaaaactgctagattaattgatattgttttgcaagttggtcgc
actggtgtggtgactcctgtgggcttgcttgatggggtaaatatcgacggagcctttgtc
aaaaacgtgactttgcataattttgatgagataaataggcttggtttgatgaagaatgat
ttggttacaatcatcagaagcggcgatgtgatacctaagattactggggtttttgctgag
cgtagagatggaagccaaactcctataagtcgcccgacaaactgcccgcagtgtggtagt
gagctacttgatgagggtgtttttatcaagtgtcaaaatctaagctgtaaagcaagagtc
gtaagctcaattatctattttacgtcaaaaaaatgtatgaatatagatgggctaggtgag
gctatagttgagcttttgtatgagcgtggaatagtgcaaaatatcgctgatatttacagg
cttgatgagcttagttttatggggattgaagggtttaaaaccaaaaaaatatcaaatttg
ctaaacgcaatcgagctatctaaaaccccaaatttggagcgtttcataacctctcttgga
atagagcatatcggcgaagttgcggctaaaaaaatagccatagcttacccagataattgg
ctagagctaagctttgaagagttaattagcttagacggatttggcgaagcaatggcgctt
agctatcttgagtttatgagagtaaatttagacaaaattaaagagcttcttggcttcata
actccaaaaatagtagaaataaaaaccacgcaaaacgcattttctggcaaaacatttgtc
atcactggcacactttctcgcccaagagatgagataaaagccgagcttgagagctttgga
gcaaaggtgagcggctcagtctcatctaagagcgattatgtactgtatggcgatgaggct
ggaagtaagctagaaaaagctctaagtcttggagtaaaaaccataaacgagcaagaatac
gaggcattaaaatga
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