Candida albicans: CAALFM_C203030WA
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Entry
CAALFM_C203030WA CDS
T00189
Symbol
LIG4, CaO19.5798
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cal
Candida albicans
Pathway
cal03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CAALFM_C203030WA (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cal03400
]
CAALFM_C203030WA (LIG4)
Enzymes [BR:
cal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CAALFM_C203030WA (LIG4)
DNA repair and recombination proteins [BR:
cal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CAALFM_C203030WA (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
3642986
NCBI-ProteinID:
XP_715339
UniProt:
P52496
LinkDB
All DBs
Position
2:610668..613454
Genome browser
AA seq
928 aa
AA seq
DB search
MTYFLNDIRPPSPNDITPSFTLLTKELFDKLDGVRKESLGDFRTVTEKKAFIIKTFINTF
RTHIGNDIYPSAKLIFPEKSGRIYFIKEVALARLLIKMYKIPKESEDYITLHDWNKSYQR
SRRFSIDEKKIRDLPLQASRIISKRRPIVDKLEEYTVPQINSSLDQLALEKVSQGQIDIL
KPLFDNLSIPEVRWLIHILLNKSILTSMERFFFNTWHPDGYRVFSICNDLQKTLQFSTNP
DLRLDPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDPPYEKKFQELGLENKFY
IEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKFLAHAFAGNIQSVILD
GEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPFFLVFDILFLNGKDLT
NYPLFFRKNILNRILRPIPNRFEVLDTRLGSSSEDIERAIREVVSSRCEGLVLKNVQSKY
EIDGFRNPDWIKVKPEYLEKFGENLDLVVIGKSPAIKNSYMCGLKSVTDGVYYSFCTCAN
GIEIEEFDKIERLTHGKWIKTDVSMPPESLIKFGTKIPTFWIHPSDSLVLEIRARSIDTR
AGTSYAVGSTLHNNHCRKIREDKSIDECVTLQEYTHIKANYINDLNKAQTALGKKREPVY
SLDNESKLKKVKVESDLFSGIEFLIMSDKREADGEVTTIEEMKAMVKQYGGKIVNSVDLA
TNYQIMVITERELPVSSQYLSKGIDLVKPIWIYECIKRGCVLQLEPYFIFASKNWDNFNH
MVDQYGDSYIIHHPLNIVVPKLSESELEDLRNGFDWGDLKPWIYLFKGLSFYVCGNNLSA
RFLKERIERFSGDLSKHFIECCYIVIPDNHSRPLMLREIDKMSNQISREMVIDKNGGSSR
IPHFVTEAFVQASIKMNYIPDPDDYKFR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacatattttttaaacgacatccgaccaccttctccaaatgatattactccatcgttc
actttattgactaaagaattgtttgacaagcttgacggggttagaaaagagagtcttggt
gattttcgaactgtcactgagaagaaagcattcattatcaaaacttttataaatacattt
cgaacacacattggcaatgatatatacccttcagcaaaactaatattcccggaaaagtcg
ggaagaatatattttatcaaagaagttgcattggctcgtcttttgattaaaatgtacaaa
atccccaaggaatcggaagactatatcacattacacgattggaacaaactgtatcaaagg
tcacgaaggttttccattgatgagaaaaagatacgtgatttgccattgcaagcatcaagg
attatttccaaaaggaggccaattgtggataaactcgaggaatatactgtaccgcaaatt
aactcttctttagatcaattggcattggaaaaggtgtctcagggtcagatagatattctt
aaaccactatttgataatctaagtataccagaagtaagatggcttattcatatactactt
aataaatcgatcttaactagcatggagagattttttttcaacacttggcacccggatgga
tatagagtgtttagcatatgcaatgacttacaaaagacattacaattttcaacaaatccc
gatttgagactagaccctctgcagttagctatacatccttgtttcaagtttaaaccacag
ttgtcagaaagattaacaaccagttataaaacccttgtgaaaaagttacaaagaaagcat
gaaatggatcctccatatgagaaaaaattccaagagttaggattggaaaataaattttac
atcgaagagaaaatggatggtgatcgtatgcttcttcataaggatggtgatagcttcaag
tttttttcacgacgcttgaaggattactcttatttatacggagaaagtttccagtttggt
gccctcactaaatttttggcccatgcttttgccggaaatatacaatctgtgattttagac
ggcgaaatggtggcctatgattatgagcgtaatgtcatccttccatttggaactttaaaa
tcactggcaattcaagaaagtgtccgacagtttacaaccatcgatcagtatgaacaacag
acagcatatccatttttccttgtgtttgacattttgtttttaaacgggaaagatttaact
aattatccgttattcttccgcaaaaacatcttgaaccgaattcttagaccaataccaaac
agatttgaagttttagatacacggctaggttcttctctggaagatatcgaaagagcaatc
agagaagttgtcagtagtcgatgtgagggtttagtattgaagaatgtacagctgaagtat
gaaattgatgggttcagaaacccagattggataaaagtcaaaccagagtatttagaaaaa
tttggtgaaaatttagatcttgtggtgattggcaaatctccagccataaaaaactcctat
atgtgcggattgaaaagtgtaactgatggcgtttattatagtttttgcacctgtgccaat
ggtatagaaattgaggagtttgataagatcgaaagactcactcatggaaagtggattaaa
acagatgtgtcaatgcctcccgaactgttgatcaaatttggaactaaaattcccactttt
tggattcatccgagtgattcgttagttttggaaatcagagctcgttcaattgacactcga
gcaggcaccctgtatgctgtggggtcaactttacataacaatcattgtcgaaaaataaga
gaagacaaatctattgatgaatgtgtgacattacaggagtacacgcatatcaaggcaaat
tatatcaatgatttaaataaagcacaaactgcattggggaagaaacgtgaacctgtgtac
tcattagataatgagctgaaattgaaaaaagtcaaagttgaatctgatttgtttagtggg
atagagtttttgattatgagtgataaaagagaggctgacggcgaagttacaaccatcgaa
gaaatgaaagcaatggttaaacagtatggtggaaaaattgtcaattctgttgatcttgca
acaaactaccaaataatggtgattactgaacgagaacttcctgtatccagtcaatatcta
agtaaaggaattgatttggtgaaaccaatctggatatatgaatgcattaaaagaggatgt
gttcttcaactagaaccatattttatatttgccagtaaaaattgggataattttaaccat
atggttgatcaatatggagactcatacatcatacaccatcccttgaacattgttgttccc
aaactttctgaaagtgaacttgaagaccttcgtaatggatttgattggggtgatcttaaa
ccttggatctacttgttcaaaggtttgtcattttacgtgtgtgggaataacttgagtgct
cgatttttaaaggaaagaattgagagattcagtggagacttgtcgaaacattttatcgaa
tgttgctacatagtaatccctgataaccattccagaccactaatgcttcgtgaaattgat
aagatgtcaaaccaaatttctcgcgaaatggttattgataaaaatggtgggtcttcgaga
attccacattttgttactgaggcattcgttcaggcttcaatcaagatgaattatattccc
gatcctgacgattacaagtttaggtga
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