Caloramator sp. Dgby_cultured_2: PWK10_04390
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Entry
PWK10_04390 CDS
T09567
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cald
Caloramator sp. Dgby_cultured_2
Pathway
cald03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PWK10_04390 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cald03400
]
PWK10_04390 (nth)
Enzymes [BR:
cald01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PWK10_04390 (nth)
DNA repair and recombination proteins [BR:
cald03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PWK10_04390 (nth)
Prokaryotic type
PWK10_04390 (nth)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WDU83783
LinkDB
All DBs
Position
655349..655975
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AA seq
208 aa
AA seq
DB search
MNNSLDIIKILEQEYGNLGCALNYTTPYELLIATILSAQTTDETVNKATAELFKDYNKPH
DIAKLTPQELEGYIKICGLYKTKAKNIIEASKIIVEQFNGNVPNKMEDLIKLPGVGRKSA
NVVLSNAFGKDAIAVDTHVFRVANRLGLANAKDVLQTEKQLMENIPKSYWSRAHHWLIWH
GRKICTARNPKCDLCKLRDFCKYFAENK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataattctttggatataattaaaatattagaacaggaatatggaaatttgggatgt
gctttgaattatacaacaccctacgaacttctaatagctacaatactatcggcacaaact
actgatgaaactgttaataaagctacagctgagctttttaaggattataataaaccccat
gatattgcaaaattaactccacaggaattagaaggttatataaaaatatgtggactttat
aagacaaaggcaaaaaatattattgaagctagtaaaattatagttgaacagtttaatgga
aatgttcccaataaaatggaagatttaataaaactgcctggggttgggagaaaaagtgct
aatgttgtcctttcaaatgcctttgggaaggatgcaattgctgttgatacacatgtgttt
agagtagcaaacagattaggccttgcaaatgctaaagatgttttgcagacggaaaaacaa
ctaatggagaatatcccaaagagttattggtctagagcacaccattggcttatctggcat
ggaagaaaaatttgcactgctaggaaccctaaatgtgacttgtgtaaattaagagatttt
tgtaaatatttcgcagaaaataaataa
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