Coraliomargarita algicola: SH580_17835
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Entry
SH580_17835 CDS
T10130
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
calg Coraliomargarita algicola
Pathway
calg00300
Lysine biosynthesis
calg00550
Peptidoglycan biosynthesis
calg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SH580_17835
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SH580_17835
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
calg01011
]
SH580_17835
Enzymes [BR:
calg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SH580_17835
Peptidoglycan biosynthesis and degradation proteins [BR:
calg01011
]
Precursor biosynthesis
Amino acid ligase
SH580_17835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WPJ95286
UniProt:
A0ABZ0RJD6
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All DBs
Position
4332297..4333772
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AA seq
491 aa
AA seq
DB search
MNLKVSQLLGGSEIVRHQLREDSPVSCLITDSRRVVPGALFFAIGGLRTDGNLFVEEAVD
RGAVAIITEENLGQHFPIDYIQVTDVRKALALVSRQFFGAPDAKLGITGITGTNGKTTVS
MLTQHLIGGQDRVGLLGTIRYDLGKRTLPSFRTTPESVDVYALLSQMVDNGCAEAVMEVS
SHGVDQKRTYGVDIDVAVFLNLTQDHIDYHKSMESYYEVKKRLFTGETGSCPRAVVINVD
CAYGRRLLEDIPKGVDVITFGIEAKTALIRAENVSLYAERTEFDLTWPGGQVHVSSPLLG
RYNVSNLLAALAIARAKGHSIESVLDRVASFPGVPGRMERVDAGQDFNLLVDYAHTDDAL
IHACSMLREITPGRLIIIFGCGGDRDRTKRAPMLRAALDGADEVYVTSDNPRTESIEQIF
ADMRAATGSEAAHYVSDRKHAISLALDCAKAGDCVLIAGKGHEAYQEFDGTVIPFDDRQI
ARELIRMKSIS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaaagttagccagcttctcggaggctctgaaattgtgcgtcaccagctgcgc
gaagacagccctgtttcctgcctgatcactgatagtcgtcgtgtggtgcccggagcgctt
ttctttgcgatcggaggtctgcgcaccgatggcaatctgtttgtcgaagaggcggttgat
cgtggcgctgtggctattattactgaagaaaatctggggcaacatttccccatcgactac
attcaagtgactgatgttcgcaaagcattggcgctggtttcgcgacaatttttcggcgct
ccggatgccaaattaggcatcacggggattaccggcaccaatggaaagaccactgtctcc
atgttgacgcagcatttgattggtggacaggatcgggtggggttgctggggacgatccgc
tacgatctcggtaagcgtactttgccttcgtttcgcactacgcccgagtctgtagatgtg
tatgctttattgtcacagatggtggataacggttgcgccgaagctgtgatggaagtcagc
tcacatggcgtcgaccaaaaacgcacctacggagtcgatattgatgtggctgtctttcta
aatctcacacaagaccacattgattatcacaagtcgatggagtcctactatgaggttaaa
aaacgcttgtttaccggggagaccgggagctgtccacgcgcagttgtgattaacgtggat
tgcgcctacgggcgtcgtctattggaggacattccgaaaggtgtggatgtgataaccttt
ggtattgaggccaagaccgcgctcatacgtgcagaaaatgtgtctctctatgcggagcgt
actgaatttgatctcacatggccaggcggacaagtgcatgtgagctcgccacttcttggg
cgctataatgtgagtaacttgttggcagcactggcgattgcccgagcaaaaggtcacagc
attgagtctgttctggatcgggttgcttctttcccgggggtgccgggccgtatggagcgt
gtcgatgccgggcaagactttaacctgctcgttgattatgcgcacacagacgatgcgttg
atacatgcatgctcgatgctacgtgaaattacgcctggacgactgatcattatctttggt
tgtggaggcgatcgtgaccgtacaaagcgtgctccgatgcttcgtgctgcgctggatggc
gcagatgaagtgtatgttacttccgacaacccgcgcactgaatcaattgagcaaatattt
gctgatatgcgtgccgcgacaggcagtgaagccgcgcactatgtcagcgaccgcaagcat
gcaatctcactggcattggattgtgcgaaagcaggtgattgtgtgctgatcgccggtaag
ggccatgaagcctatcaagaatttgatggaactgtgattccttttgatgatcgtcaaatc
gcgcgcgaattgattcgaatgaaatctatttcctaa
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