Coraliomargarita algicola: SH580_18190
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Entry
SH580_18190 CDS
T10130
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
calg Coraliomargarita algicola
Pathway
calg01501
beta-Lactam resistance
calg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH580_18190
01503 Cationic antimicrobial peptide (CAMP) resistance
SH580_18190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calg02000
]
SH580_18190
01504 Antimicrobial resistance genes [BR:
calg01504
]
SH580_18190
Transporters [BR:
calg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SH580_18190
Antimicrobial resistance genes [BR:
calg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SH580_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPJ95354
UniProt:
A0ABZ0RGQ7
LinkDB
All DBs
Position
4411528..4414644
Genome browser
AA seq
1038 aa
AA seq
DB search
MLISDISVKRPVFASVISLILIAFGLVSFQRLSLREYPDIDPPVVTVEVSYPGAPANIVE
TRITKLLEERIAGIEGIEYVESSSQDGEASVTIEFAIDRDIDGAANDVRDRISGIQDNLP
EEAEPPEVQKVDSNDDVIIWRNLASDRHSIEELTDYAERYLVDRYSTLDGVARIRIGGGL
RYAMRVWLDRQELAARGLSVSDVEDALRAENVELPAGSLESDVRLFKARVDRKFKEPEDF
GKLVLAEGDDGYLIRLADVARVELGVEENRIMFRGNEVPMVGIGTIKQSTANTIDVARQV
KALTAEINKSLPEGMSIEESYDASVFIEEAIHEVYTTLFIAIGCVIVVIYLFLGSVRATL
VPAVTVPVSVIATFIVVYSLGFSINLLTLLALVLAIGLVVDDAIVMLENIVRRIQELGEP
PLLAAYRGARQVGFAVIATTLVLVAVFVPITFLEGDIGRLFTEFALTIAAAVCFSSLVAL
TLSPMLASKVLSRQTEPNFLVRGIDATIRFFRTGYLGALRFCLRVPLLVVAVFVGLLALI
ALVYSKVPQEFAPTEDRGVIFLLVNGPEGATFNYMEEYMTEIEQRMLPFVESGEIRRMLV
RSPRSFGNLENFNSGIVIFILEDWAKRRSAFDMINDIRAKLADLPGVRAFPVIRQGLGGG
TSKPVQFVLGGSTYEELAAWRDIIMEQVEANNPGLVGLDSDYKETRPQIDLSVNYDRAAT
LGVTIEQIGRTLETMMGGRNVTTFLQRGEEYDVIVEGERESQRSFADIENIYVRSERTGE
LIPLSNLVSINEYGAAETLSRYNRVRSITLEANLEDGYTLGEALGYLEGLVREHLPEEAI
VDYKGQSREFVQSGSSILFIFVLGIIVVFLVMAAQFESYIHPFVIMLTVPLAIGGGLLGL
FLTGGTLNIYSQIGLIMLIGLAAKNGILIVEFANQLRDEGRSFREALIEACETRFRPIAM
TGLTTIAGSVPLVLSSGAGAETRSVIGIVTLFGVVAATLFTLFIVPVAYDLIARRTSSPQ
AVEKELNQLAVDENAMNI
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttccgatatttctgttaaacgtccggtctttgcttcggtcatttcgctgatt
ctgatcgccttcgggctggtctcttttcagcgactttccttacgcgagtatcccgatatc
gatccgccggtggtcacggtcgaggtttcgtatccgggcgcgccggccaatattgtggag
acacggatcaccaagctgctggaggagcgcatcgccggtatcgagggcatcgagtatgtc
gagtcgagctcgcaggacggtgaagccagcgtgacgattgaatttgccatcgaccgcgac
atcgacggcgcggccaacgatgtgcgcgaccgcatctcgggcattcaggataatttgccg
gaagaggccgagccgccggaagtgcaaaaggtggatagtaacgacgacgtgatcatttgg
cgcaatctcgccagcgaccgtcacagcatcgaggagttgaccgactacgccgagcgctat
ctggtcgaccgttactcaacgctcgatggcgtggcccgcatccgtatcggcggcggcctg
cgctacgccatgcgggtgtggctcgaccgtcaggagctggcggcgcgtgggctcagtgtg
tccgatgttgaagatgcgctgcgcgctgaaaatgtggagttgcccgcaggctcgctggag
tccgatgtgcgcttgttcaaagcgcgggtggatcgtaaattcaaggagcccgaagacttt
ggcaaactcgtgctggctgaaggcgatgacggctatttgattcgcctcgcggatgtcgcc
cgtgtcgaactcggcgtggaggaaaaccgtatcatgtttcgcggcaatgaagtgcccatg
gtcggtatcggcacgattaagcagtccacagccaataccattgatgtggcccgtcaggtc
aaggcgctcacggcggaaatcaacaagagcctgcccgagggcatgagcatcgaggaaagt
tacgatgcctcggtctttatcgaagaggcgattcatgaagtgtataccacgctcttcatt
gcgatcggctgtgtgatcgtggtgatctatcttttccttggtagtgtgcgggccacactg
gtgcccgcggtgacggttccggtctcggtcatcgcgacctttatcgtagtctatagcctc
gggttttcgattaacttgctgaccttgttggcgctggttctggctatcggactggtggtg
gacgatgcgattgtgatgttggaaaacatcgtgcgtcgcatccaagagctcggcgagccg
cccttgctggcggcttatcgcggggcccgtcaggtcggcttcgcggtgattgcgaccacc
ttggtcttggtggcggtctttgtgccgattacctttctggagggcgacatcggacgtttg
tttaccgagtttgcgctcacgattgctgcggcggtgtgtttttcctctctggtggcgctg
acgctttcgcccatgctggcctccaaggtattgagccgtcagacggagccgaatttcctc
gtgcgtgggattgatgccacgatccgttttttccgcaccggctatctgggggctctgcga
ttttgcctgcgcgtgccattgttagtggtggccgtctttgttgggctgctcgccttgatt
gcattggtctatagcaaggtgccacaggaatttgcgccgacagaagaccgcggtgtgatc
ttcctcttggtcaatggccccgaaggcgcgacctttaactatatggaagagtatatgaca
gagatcgagcaacgcatgttgccctttgtcgaaagcggggagatccgccgcatgttggtg
cgttcgcctcgctcttttggtaatctggaaaacttcaattccggcatcgttattttcatt
cttgaagattgggcgaagcgacgcagcgcctttgacatgatcaatgacatccgtgccaaa
cttgccgatttaccaggcgtgcgagcctttcctgtcatccgtcaaggactcggcggcggc
acttccaagccggtgcaatttgtgctcggcggatccacctacgaagaactagctgcctgg
cgcgatatcatcatggagcaagtcgaggccaacaaccccggtctggtggggctggacagc
gactacaaagagacccgtccgcagatcgacctatcggttaactacgaccgagccgcgaca
ctcggggtgaccatcgagcagatcggccgcaccctcgaaaccatgatgggtgggcgcaac
gtgacgaccttcctgcagcgcggcgaggaatacgatgtgatcgtcgaaggagagcgggag
agccagcgttctttcgccgatatcgaaaacatctacgtgcgcagtgaacgcaccggcgaa
ttgatccctttgtcgaatctcgtatccattaatgaatacggagccgcggagacactctca
cgctacaatcgcgtgcgctccatcacactggaggcgaatctggaagacggctacacactc
ggcgaggcgctgggctatctggaaggcctagttcgcgagcacttgcccgaagaggcgatt
gtcgactacaaggggcagagtcgcgaattcgtacaatccggcagttcgattctgtttatc
ttcgtcctcgggatcatcgtggttttcctcgtcatggctgcgcaatttgagagctacatt
cacccatttgtcattatgctgaccgtgccactcgcgattggtggcggtctcttgggcttg
ttcctgaccgggggcactttaaatatctattcgcagatcgggctcattatgttgatcggt
ctggccgcgaagaacggtatcctaattgttgaatttgccaatcagttacgcgacgaaggc
cgctccttccgcgaggcgctgattgaggcttgtgaaacacgcttccgtcccattgccatg
accggattgacgacgatcgccggatcggtcccgctggttttgagcagcggagccggagcc
gaaacacgctccgtcatcggtatcgtcacactcttcggcgtggtggccgcgaccttgttc
acgctcttcattgtgcccgtcgcttatgacttgatcgcccgccgcaccagctcaccacaa
gccgtggagaaagaactcaatcagctcgctgtcgatgagaacgcgatgaatatttaa
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