Coraliomargarita algicola: SH580_21610
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Entry
SH580_21610 CDS
T10130
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
calg Coraliomargarita algicola
Pathway
calg01501
beta-Lactam resistance
calg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
calg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH580_21610
01503 Cationic antimicrobial peptide (CAMP) resistance
SH580_21610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
calg03036
]
SH580_21610
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calg02000
]
SH580_21610
01504 Antimicrobial resistance genes [BR:
calg01504
]
SH580_21610
Chromosome and associated proteins [BR:
calg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SH580_21610
Transporters [BR:
calg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SH580_21610
Antimicrobial resistance genes [BR:
calg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SH580_21610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
OEP
Biotin_lipoyl
CusB_dom_1
DUF4131
Motif
Other DBs
NCBI-ProteinID:
WPJ96015
LinkDB
All DBs
Position
5301263..5302411
Genome browser
AA seq
382 aa
AA seq
DB search
MISHYVILVIFCLSVFLAGCGDGDVRARQSTRPAAPVEVAAIEQGSIRELRVFSGALEAS
ASFPISPKVSGLIEEIHVDIGDTVQQGMVVATLDDAEYQQALTQAQADLLVAQANLMESE
SHLKIAQRAMERSRVLRERGVASEAEFDIVQSDLLAAEARLEVQKAQIQRAESSVESARI
QLGYTEVRALWSGDASARAVAERYADEGETLNALSPLIRIVDVDPLTGVFFVSEKDYPQL
SLGQTVDLETDAYPNETFTASIERIAPVFQVSSRQARIEITVPNADTRLKPGMFVRAKVV
VREVEQAQIVPDVALVTRSDTQGIFLVDEAGQTAQWRPVEVGVREGNRVQVLGENLAGHV
IVLGQQLVEDGSPISLVSHPAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcattacgtaattctagttatattctgcctcagcgtattcctggctggttgc
ggtgatggtgacgtgagggctcgtcagagcacgcgtcctgccgcgcccgtggaagtggct
gctatcgagcagggctctattcgtgagctgcgggtcttcagcggtgctttggaggcgagt
gcatcattcccgatttctcctaaagtcagtggtctgatcgaggaaatacatgtcgatatc
ggtgacacagttcaacaaggcatggtcgtggccaccctggatgatgcggagtatcaacaa
gcactgacacaggctcaggcagacttgttggtcgcgcaggccaatttgatggagtccgaa
agtcatttgaagatcgcgcagcgtgccatggagcgctcgcgggtgttgcgcgagcgcggc
gtggcctcggaggcggagtttgacatcgtccagagtgatctattggcagctgaggcgcgg
ttggaagtgcaaaaggcacagatccagcgtgcggagtcgtcggtggaatcggcccgtatt
caattaggatatactgaagtgcgcgcactttggtcgggggatgcttcggcgcgggcggtt
gcggagcgatatgctgacgaaggcgaaactctcaatgcgctatcgcctttgatacgtatc
gtggatgtcgatccgctgactggagtcttttttgtgtcggaaaaggattatccacaattg
tcgcttggtcagaccgtcgacttggaaacggatgcttatccgaacgagacttttacagct
tctatcgaacgcattgcgcctgtctttcaagttagctctcgtcaggcacgtatcgaaatt
acagttcccaatgcagacacccgcttgaagcctggcatgtttgtgcgtgccaaggtcgtg
gtgcgggaagtcgagcaggcgcagattgtacccgatgttgccttggtgactcgttccgat
acgcaaggtattttcctggttgatgaagcagggcagaccgcgcaatggcgcccggtggaa
gtcggtgtgcgcgagggaaaccgtgtgcaagtgctgggagaaaatctagcaggtcatgtg
atcgtgctggggcaacagttggttgaggacggttcacctatttcattagtatcgcatcca
gctaaatga
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