Candidatus Contubernalis alkaliaceticus: HUE98_09595
Help
Entry
HUE98_09595 CDS
T07972
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk01501
beta-Lactam resistance
calk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUE98_09595
01503 Cationic antimicrobial peptide (CAMP) resistance
HUE98_09595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
calk03036
]
HUE98_09595
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calk02000
]
HUE98_09595
01504 Antimicrobial resistance genes [BR:
calk01504
]
HUE98_09595
Chromosome and associated proteins [BR:
calk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HUE98_09595
Transporters [BR:
calk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HUE98_09595
Antimicrobial resistance genes [BR:
calk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HUE98_09595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
UPF0242
YjbH
Borrelia_P83
Motif
Other DBs
NCBI-ProteinID:
UNC92329
LinkDB
All DBs
Position
1932539..1933792
Genome browser
AA seq
417 aa
AA seq
DB search
MRCRVLAVLVCLLLLWSGVIGCTPSQVVGEAGLQKPVVMTTRAQIGEIQETLVLSGQVTP
RVHINVIPEIAGRVVKIEVQEGDYVTKCQQLAKLDAESQRLQLEQARASLRLAQAQLANA
RENYEQQKEREQNLSSRAAQSQQDFQEQLDQLEEMYEEKEITEEERNNFRSLIELYQSQY
QSQSEALESSLRGLMGVTPQQLKMIEIQVEQARIQVQLAELLYSKMTLEAPREGTVAMVN
LKEGEIASPSMPAVILTEIDTMYVQAALPEGAVNRVFPGLKVSVFVPAVREEPFEGEVEE
VMSFTPDGSRSYPVKVVLDNNQGLLKGGMYARMEIPVEQREEAILIPLEALLLEEGADSV
FVVDNNKAVKKQVQLGLRDETRVEILEGLSSGDRVITRGQGSLLNGMEVEVMEEDTP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgagatgcagagtgttggcggttttagtatgtctgctgctgttatggagcggtgttata
ggttgtaccccatcccaggtggtaggggaagccgggttacaaaagccggtggttatgaca
accagggcccaaataggagaaattcaggagacgctggttctttcgggacaggtgactccc
cgggtacatattaacgtaattccggagattgcgggcagagtggttaagatagaagtccag
gaaggggattatgttaccaagtgtcagcagctggcaaagctggatgctgagagccagcgg
ctgcagctggagcaggcccgggcgtccctgagactggcgcaggcccagctggccaatgcc
cgggaaaattatgagcagcaaaaggaacgagagcagaacctgtcttcccgtgctgcacag
agtcaacaggattttcaggagcagctggatcagctggaggagatgtatgaggagaaggaa
attaccgaagaggaacggaacaatttccgcagccttattgagctgtaccaatctcagtac
cagtcacagtccgaagccctcgaatccagcttgagaggcctgatgggggttactcctcag
cagcttaaaatgatagaaattcaggtggagcaggccaggattcaggtgcagctggctgaa
ctgctctacagcaaaatgacgctggaagctcccagagagggaaccgtggccatggtgaac
ctgaaagagggggaaattgcctctccctccatgccggcggttattctcacggaaatagat
accatgtatgtacaggcagcgctacctgagggagccgtgaaccgggtatttcccggcctg
aaagtatcggtttttgttcccgcagttcgggaagaaccctttgaaggggaagtggaggaa
gtcatgagcttcacccccgacggcagccgttcctatccagtcaaggtggttctggacaac
aaccagggccttttaaagggaggaatgtacgcccgaatggagattccggtggaacagcga
gaggaagcgatccttattcccctggaagcgctgttactggaagaaggggcggactctgtc
tttgtcgtagataataacaaagcggttaaaaagcaggttcagctgggcctcagggatgaa
acccgggtggaaatcctggagggcctcagctcaggagaccgggtgattactcggggacag
ggcagcctcctcaacggaatggaagtggaagtgatggaggaggataccccatga
DBGET
integrated database retrieval system
