Candidatus Contubernalis alkaliaceticus: HUE98_09755
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Entry
HUE98_09755 CDS
T07972
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
calk
Candidatus Contubernalis alkaliaceticus
Pathway
calk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUE98_09755 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_09755 (nth)
Enzymes [BR:
calk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HUE98_09755 (nth)
DNA repair and recombination proteins [BR:
calk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUE98_09755 (nth)
Prokaryotic type
HUE98_09755 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
p450
Motif
Other DBs
NCBI-ProteinID:
UNC92358
LinkDB
All DBs
Position
complement(1961706..1962341)
Genome browser
AA seq
211 aa
AA seq
DB search
MNKNEAAEILKLLDKMYPNPRTDLLFNNSFELLIAVMLSAQTTDKQVNRVTEKLFKKYPT
PWDFINLTPEELEKDIKKCGLFRNKSRNIVTTANIIVQEYNGKVPDRLEQLLKLPGVGRK
TASVVLANAFGIPAFPVDTHVYRVSYRLGLAGGKNPLVTEKELKEIIPESLWNKAHHWLI
AHGRTFCSARRPQCQECPLLDYCKNGKKNIL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgaagcagcagaaattttaaaattgctggacaaaatgtatccaaacccc
aggacagacctgctctttaacaattcttttgaattgttaatagctgtgatgttatcagca
cagaccacggataaacaggtgaacagggttacagaaaaattatttaaaaaataccctacg
ccatgggattttataaatctaacccctgaagaattggaaaaggatattaaaaagtgcgga
ctctttagaaataaaagcagaaacattgtaaccacagctaatatcatcgttcaggaatat
aatggaaaagttccagacaggctggagcaattactaaagctgcctggggtgggaagaaaa
actgccagcgtagtgttagcaaatgcttttgggataccggcgtttcctgtggatactcat
gtttaccgggtatcataccggttggggctggcgggtggaaagaatcctctggtgacggag
aaggagttaaaggaaataataccagagtcattgtggaataaagctcaccactggttgatt
gcccacggacgtactttttgcagcgcccgtcgcccccaatgccaggaatgtcctctgcta
gattattgtaaaaacgggaaaaaaaatattttataa
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