Calothrix sp. NIES-2098: NIES2098_07350
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Entry
NIES2098_07350 CDS
T08374
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln01501
beta-Lactam resistance
caln01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIES2098_07350
01503 Cationic antimicrobial peptide (CAMP) resistance
NIES2098_07350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caln03036
]
NIES2098_07350
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_07350
01504 Antimicrobial resistance genes [BR:
caln01504
]
NIES2098_07350
Chromosome and associated proteins [BR:
caln03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NIES2098_07350
Transporters [BR:
caln02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NIES2098_07350
Antimicrobial resistance genes [BR:
caln01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIES2098_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
BSH_RND
Beta-barrel_RND
BSH_YknX
YknX_C
Biotin_lipoyl
CzcB_C
HH_MFP_RND
RnfC_N
RND-MFP_C
Beta-barrel_RND_2
HH_CzcB
FKBP15
Vps53_N
BSH_CzcB
CC_Bre1
MG280
Motif
Other DBs
NCBI-ProteinID:
BAY07618
LinkDB
All DBs
Position
884238..885557
Genome browser
AA seq
439 aa
AA seq
DB search
METPKETPKIDSSALRKLSGQQGLLLGLGLGLVLAISGMAIFSYFGNQRSATPNQNAPAA
NARNAALPVQVQQVGTSTTEESSDFVGALEAQQKVTLQPQIQGRIEAILVSSGQRVQKGT
PIASLSLDQTQANVASSVAAASAAQAGLKTAQAQLQQAQAQRTKVAANVQLQQTQFNRTQ
QLVAEGAQARQELDVARNNLQTAIADLQAADKQVAAAGAGVRQAQASVRQAQAGTAAAQV
NVNLKRVVAPITGVVGEFPVKVGDYVNTGQTITTIVQNNALDLNLSVPSNRLKQLRIGLP
VQLIDPTTQKVIGTGAVNYISPTVSANQQSILSKARFVNSQGRLRDGQYVQGRIIWSRQP
GILIPTVAISRIGGQSFVFVTENTTVNGKPQQIVHQRLVRLGDIQGPNYQVLDGLKPGET
IVTSGILKLREGTPIQPQS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcctaaagaaactcctaaaattgatagttctgctttaagaaagctttcagga
cagcaagggctgttgctagggttagggctgggtcttgtcttagctatcagtgggatggct
atattttcctattttggaaatcagcgttcggctactcctaatcaaaatgctcccgcagca
aatgctagaaacgcagcattgccagtgcaagttcagcaagttggtacgagtacgactgaa
gaaagttccgattttgtgggagcattagaagcacagcaaaaagtgacgctgcaaccgcaa
attcaggggcgaattgaagcaattctggtgtctagcggtcaaagagtgcaaaaaggaacg
ccgatcgcatctttgagtttggatcaaacgcaggcaaatgttgctagttccgttgcagca
gccagtgcagcccaagcggggttaaaaacggctcaagcccagctacaacaagcccaggcg
caacgtaccaaagttgcagccaacgttcagcttcagcaaacccaattcaatcgcacccaa
caattagtagctgagggcgcacaagccagacaagagttagatgtagcgcgaaataattta
caaactgcgatcgcggatttgcaagccgcagataaacaagttgcggcagctggtgcagga
gtgcgacaagcccaagccagtgtacgtcaagcccaagcaggtacggctgctgcccaagtt
aacgtgaatctcaaacgagtggtagcaccgattactggcgtagtcggtgaatttcctgtg
aaagttggagattatgtcaatactggacaaaccatcactacgatcgtccaaaacaatgcc
ttggatctaaatctttctgtaccgtcaaatagattaaagcaactgcgaattggattgcct
gtgcagttaatcgatccgacgacgcagaaagtcataggtacaggtgcggttaactatatt
tctccaacagtcagtgctaatcagcagtcgattttgagtaaagcacgctttgtcaattcc
caagggcgattgcgcgatgggcaatacgttcaagggcggataatttggagccgacaacca
ggaatattgattcctaccgtcgcgatatctcggattggcggacaaagttttgtctttgtc
acagaaaacacaaccgtcaacggcaaaccacagcaaatcgtgcatcagcgtttagtgcgc
cttggcgatattcaagggcctaattatcaagttctcgatggactcaaacccggtgaaacc
attgtcacctctggcattctcaaactgagagaaggcacacccattcaaccacaatcctaa
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