Calothrix sp. NIES-3974: NIES3974_03780
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Entry
NIES3974_03780 CDS
T09641
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES3974_03780 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_03780 (nth)
Enzymes [BR:
cals01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NIES3974_03780 (nth)
DNA repair and recombination proteins [BR:
cals03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES3974_03780 (nth)
Prokaryotic type
NIES3974_03780 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
RHH_8
Coatomer_g_Cpla
Motif
Other DBs
NCBI-ProteinID:
BAZ03748
UniProt:
A0A1Z4NDD7
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All DBs
Position
481790..482449
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AA seq
219 aa
AA seq
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MTLTRTRKSSSQKQRALEILVRLKRIYPDATCSLNYSTPVQLLVATILSAQCTDERVNKV
TPELFARFPDAVAIANADVTEIEELIKSTGFYRNKAKNIQAACRRIVTDFGGEVPQRMDD
LLTLAGVARKTANVVLAHAFGINAGVTVDTHVKRLSNRLGFSKHEDPIRIERDLMKLLPQ
EDWENWSIRLIYHGRAVCKARSPQCGICQLADLCPSAEL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaccctaactcgtacacgcaaaagctcgtcacaaaaacaaagggcactagaaattctc
gtgcgtctcaaacgtatctatcccgatgcaacatgttctttaaactactctacccctgtc
caattacttgtggcaacgattctttccgcccagtgtacggatgagcgggtaaataaagtg
acaccagaattatttgcccgctttcccgatgcagtcgcgatcgccaatgcggatgtcaca
gaaattgaagagttaatcaaatcaacgggattttaccgcaacaaagcgaaaaatattcaa
gctgcttgtcgtcggatagttacagactttgggggagaggttccccaacggatggatgat
ttactgactctagcgggtgtggcgaggaaaacagcaaacgtagttctagcccatgccttt
ggtattaatgccggagtaacggtggatacccatgtgaaacgattaagcaaccgtttaggc
tttagcaaacacgaagacccgatacgcatcgaacgggatttgatgaaattattaccacag
gaagattgggaaaactggtcaatcagattaatttaccacggtcgggctgtctgcaaagcg
cgatcgccccaatgtggtatttgtcagctagcggatttatgtccctctgcagaattgtag
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