Cicer arietinum (chickpea): 101491968
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Entry
101491968 CDS
T02819
Name
(RefSeq) 5'-3' exoribonuclease 4-like isoform X4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
101491968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101491968
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
101491968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
101491968
NCBI-ProteinID:
XP_012569932
UniProt:
A0A1S3E2B9
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All DBs
Position
4:complement(4998697..5007933)
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AA seq
944 aa
AA seq
DB search
MGVPAFYRWLVDRYPLSISDVVEEEPAVADDAVPVPVDASKPNPNGIEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSVFDYVDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLRNEFIDEGILLSSKEKPETSDSNVITPGTKFMSALSVALQYYVQ
TRLNHNTAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQHDRCFVCGQAGHFAADCHGKPETKTEDWDPADDIPIHKK
KYQFLNIWVLREYLQYELEIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
IDLLMNIYRKEFTAMGGYLTYAGEVFLDKVEYFIQSVAVHEDQIFQKRVRIQQVAENNEE
MRARARGVMLEVPRPSFSDKVKLGEPGYKERYYVEKFGVSSPDEIDKIKKDIVLKYAEGL
CWVCQYYYNGVCSWKWYYPYHYAPFASDLNDLTNLEIIFFPGEPFKPFDQLMGVLPASSS
NALPEKYRDLMNDPSSPIFDFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRKLED
TLTEEEQLRNSVMLDLLYVNRAHHLASHILLYYQVYGQLPTHERFVSPIDTNASDGMNGY
LWACERNVLSSIVPSPIDGLPDIECNQVLNITYLHPCRHGHIPKPPDGVVIPKKILKATD
IKSFPVPWHEDNVGRGLQGRERPQVPGAITGSQLGEAAHRLVKNTLNIKWSNTSHGGYDG
EYNHHGIKSPSGPSGYGKYYGENTNSYYGEYNHHGIMTRHRYPSSSSGGQMDRQNFRIQD
RPRHQEQFQNVKNGFSALTMEEGSRPKPPRLPISGPTTNLEPRFGQNTVRPIPPPKWNNK
APVNGMYTRRQETSFGAGPHDKKMKKVYQVKTRVPQVTPDCGNQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccagctttttaccgctggctcgtcgaccgttacccactctcgatctccgat
gtagtggaagaagaaccagccgtcgcagacgacgccgttccggtgcctgttgatgcgtct
aaacccaatcccaacggaattgagttcgataacttgtacttggacatgaacggcatcatt
cacccttgttttcaccctgatggcaaaccagcaccagctacctatgatgatgtgtttaaa
tcggtatttgattatgttgaccatctcttttcgttggttcgtccgaggaagcttctctat
cttgcaattgatggtgttgcaccaagagccaaaatgaatcagcaacgttctcggcgattc
cgagctgctaaagatgcagcagaggctgaggctgaagaggaaaggcttaggaatgaattc
atcgatgaggggatacttttgtcttctaaagagaagcctgagacttcagactcaaatgtc
attacccctggtactaaattcatgtcagctctgtcagtggctcttcagtattatgtgcag
accagattgaaccacaacactgcctggaaaaatattaaggttatactttctgattcaaat
gttcctggcgagggagaacataaaataatggaatacatccggttacaacgcaacattcct
ggttttaatccgaatactcgacattgtttgtatggattggatgcggatttgattatgctc
tccttagctacacacgaggttcacttctcaatattgagggaggtaattactttacctgga
caacatgataggtgttttgtgtgtggccaagctggccattttgcagctgattgtcatggt
aagccagaaactaaaaccgaggactgggatcccgctgatgatatcccaatacacaagaag
aaatatcagtttcttaacatctgggtgcttcgtgaatatttgcaatatgaattggagatt
cccaaccctccttttgaggttgactttgaacgaatagtggatgattttgtatttctctgc
ttctttgtcggcaatgactttcttccacatatgccaacattagagatcagggagggagct
atagatttactgatgaatatttatagaaaggaatttactgccatgggtggctatcttact
tatgcgggtgaggttttcttagataaagttgaatattttatccaatctgtcgctgtccat
gaagatcaaatctttcagaaacgagttcgaatacagcaggtagcagaaaataatgaagag
atgagagctagggcaagaggagtaatgcttgaagtgccaagaccctcattttccgacaag
gtcaagttaggggagcctggatacaaggaaaggtattatgttgaaaagtttggtgtatca
agtccggatgagattgataaaattaagaaagatatagttttgaaatatgcagaaggcctt
tgttgggtttgccagtattactataatggtgtatgctcatggaaatggtactacccgtat
cactatgctccttttgcttctgatcttaatgatctaactaatctagaaataatttttttc
ccgggagagccatttaaaccatttgatcagcttatgggggttctacctgcttcaagttca
aatgcactgcctgaaaaatatagggatttaatgaatgatccttcatcacctatttttgac
ttctaccctgctgattttgagattgatatgaatggaaaacgatttgcatggcagggtgtt
gctaaattgccatttattgatgagaagaaattgcttgctgccacaaggaaacttgaagac
acattaacggaggaagaacagcttcggaatagtgtgatgcttgatttgctttatgtcaac
cgagcacatcatttggcttcacatattttattgtattaccaagtttatggtcaattaccc
acccatgaaagatttgtttcaccaattgacactaatgctagtgatgggatgaacggatat
ctttgggcatgtgagagaaacgttttgagctctattgtaccgtctccaattgatggattg
ccagatatagagtgtaatcaagtcttaaatattacatatcttcatccttgtagacatgga
cacatcccaaaacctccggatggtgtagtgatacccaaaaagatattaaaagccactgat
ataaaatcttttcctgtgccatggcatgaagacaatgttggtcggggactgcaaggcagg
gaaaggccacaagtacctggagcaataactggatctcaattaggagaagcagctcatcga
cttgtgaagaacacccttaacattaaatggagtaatacatcccatggaggttacgatgga
gaatataatcaccatggcattaaatcaccatctggaccatctggatatggaaaatattac
ggcgagaacacaaacagttactatggtgaatataatcaccatggcataatgactagacat
agatatccaagctcatctagcggcgggcagatggacagacagaattttagaatacaagat
aggccacggcatcaagaacagttccaaaatgtgaagaatgggttttctgcattaacaatg
gaggaaggatcaagacctaagccaccgaggctgccaatttctggaccaacaacaaatttg
gaaccccgatttgggcagaacacggtccgtccaataccacctccaaagtggaataataaa
gcacctgtaaatggaatgtatactaggcgtcaggaaacttcatttggcgcagggcctcat
gataagaagatgaagaaggtttaccaagttaaaacacgtgtgccccaagtaactccagat
tgtgggaatcagtag
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